Structural Biology Software Database
Structural Biology Software Database

Application Index Record

Category: DNA, RNA and Protein Stucture Prediction
Circles
Last Update: 10-25-2001

Description:
Circles is an experimental Windows 95/98/NT program for inferring RNA secondary structure using the comparative method. It provides a user-friendly interface to Jack Tabaska maximum weight matching programs. The user can read in an alignment in FASTA, Clustal, or NEXUS format, compute a maximum weight matching, and export one or more secondary structures in standard formats.

Homepage:
http://taxonomy.zoology.gla.ac.uk/rod/circles/

Documentation Page:
http://taxonomy.zoology.gla.ac.uk/rod/circles/manual.html

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