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hoomd_data_t Struct Reference

List of all members.

Public Attributes
FILE *	fp
XML_Parser	p
void *	buffer
int	parsedepth
int	parse_error
int	currtag [HOOMD_MAXDEPTH+1]
int	counter
int	majv
int	minv
int	optflags
int	numframe
int	doneframe
int	numdims
int	numatoms
int	numtypes
int	numbonds
int	numangles
int	numdihedrals
int	numimpropers
int	numbondtypes
int	numangletypes
int	numdihedraltypes
int	numimpropertypes
int *	from
int *	to
int *	bondtype
int *	angle
int *	dihedral
int *	improper
int *	angletype
int *	dihedraltype
int *	impropertype
char **	bondtypename
char **	angletypename
char **	dihedraltypename
char **	impropertypename
char *	filename
float	mysigma
int *	imagecounts
molfile_atom_t *	atomlist
molfile_timestep_t	ts

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Member Data Documentation

int* hoomd_data_t::angle

Definition at line 206 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_angles, write_hoomd_structure, and xml_data_block.

int* hoomd_data_t::angletype

Definition at line 209 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

char** hoomd_data_t::angletypename

Definition at line 213 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

molfile_atom_t* hoomd_data_t::atomlist

Definition at line 219 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_write, read_hoomd_structure, and xml_data_block.

int* hoomd_data_t::bondtype

Definition at line 205 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_bonds, write_hoomd_structure, and xml_data_block.

char** hoomd_data_t::bondtypename

Definition at line 212 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

void* hoomd_data_t::buffer

Definition at line 183 of file hoomdplugin.c. Referenced by hoomd_parse_line.

int hoomd_data_t::counter

Definition at line 187 of file hoomdplugin.c. Referenced by open_hoomd_read, read_hoomd_structure, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::currtag[HOOMD_MAXDEPTH+1]

Definition at line 186 of file hoomdplugin.c. Referenced by xml_data_block, xml_end_tag, and xml_new_tag.

int* hoomd_data_t::dihedral

Definition at line 207 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

int* hoomd_data_t::dihedraltype

Definition at line 210 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

char** hoomd_data_t::dihedraltypename

Definition at line 214 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

int hoomd_data_t::doneframe

Definition at line 191 of file hoomdplugin.c. Referenced by open_hoomd_read, read_hoomd_structure, read_hoomd_timestep, and xml_end_tag.

char* hoomd_data_t::filename

Definition at line 216 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, hoomd_parse_line, open_hoomd_read, open_hoomd_write, and read_hoomd_structure.

FILE* hoomd_data_t::fp

Definition at line 181 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, hoomd_parse_line, open_hoomd_read, open_hoomd_write, read_hoomd_structure, read_hoomd_timestep, write_hoomd_structure, and write_hoomd_timestep.

int* hoomd_data_t::from

Definition at line 203 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_bonds, read_hoomd_structure, write_hoomd_bonds, write_hoomd_structure, and xml_data_block.

int* hoomd_data_t::imagecounts

Definition at line 218 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_structure, read_hoomd_timestep, write_hoomd_timestep, and xml_data_block.

int* hoomd_data_t::improper

Definition at line 208 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

int* hoomd_data_t::impropertype

Definition at line 211 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

char** hoomd_data_t::impropertypename

Definition at line 215 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, and xml_data_block.

int hoomd_data_t::majv

Definition at line 188 of file hoomdplugin.c. Referenced by open_hoomd_read, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::minv

Definition at line 188 of file hoomdplugin.c. Referenced by open_hoomd_read, xml_data_block, xml_end_tag, and xml_new_tag.

float hoomd_data_t::mysigma

Definition at line 217 of file hoomdplugin.c. Referenced by open_hoomd_read, read_hoomd_structure, and xml_new_tag.

int hoomd_data_t::numangles

Definition at line 196 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_angles, write_hoomd_structure, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::numangletypes

Definition at line 200 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, and xml_data_block.

int hoomd_data_t::numatoms

Definition at line 193 of file hoomdplugin.c. Referenced by open_hoomd_read, open_hoomd_write, read_hoomd_structure, write_hoomd_structure, write_hoomd_timestep, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::numbonds

Definition at line 195 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_bonds, read_hoomd_structure, write_hoomd_bonds, write_hoomd_structure, xml_data_block, and xml_end_tag.

int hoomd_data_t::numbondtypes

Definition at line 199 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, write_hoomd_bonds, and xml_data_block.

int hoomd_data_t::numdihedrals

Definition at line 197 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_angles, write_hoomd_structure, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::numdihedraltypes

Definition at line 201 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, and xml_data_block.

int hoomd_data_t::numdims

Definition at line 192 of file hoomdplugin.c. Referenced by xml_new_tag.

int hoomd_data_t::numframe

Definition at line 190 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_structure, read_hoomd_timestep, write_hoomd_timestep, and xml_data_block.

int hoomd_data_t::numimpropers

Definition at line 198 of file hoomdplugin.c. Referenced by close_hoomd_write, open_hoomd_read, open_hoomd_write, read_hoomd_angles, read_hoomd_structure, write_hoomd_angles, write_hoomd_structure, xml_data_block, xml_end_tag, and xml_new_tag.

int hoomd_data_t::numimpropertypes

Definition at line 202 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_read, open_hoomd_write, and xml_data_block.

int hoomd_data_t::numtypes

Definition at line 194 of file hoomdplugin.c. Referenced by open_hoomd_read, and xml_new_tag.

int hoomd_data_t::optflags

Definition at line 189 of file hoomdplugin.c. Referenced by open_hoomd_read, read_hoomd_structure, and xml_new_tag.

XML_Parser hoomd_data_t::p

Definition at line 182 of file hoomdplugin.c. Referenced by close_hoomd_read, hoomd_parse_line, open_hoomd_read, read_hoomd_structure, and read_hoomd_timestep.

int hoomd_data_t::parse_error

Definition at line 185 of file hoomdplugin.c. Referenced by hoomd_parse_line, open_hoomd_read, read_hoomd_timestep, xml_data_block, and xml_end_tag.

int hoomd_data_t::parsedepth

Definition at line 184 of file hoomdplugin.c. Referenced by read_hoomd_structure, xml_comment, xml_data_block, xml_end_tag, and xml_new_tag.

int* hoomd_data_t::to

Definition at line 204 of file hoomdplugin.c. Referenced by close_hoomd_read, close_hoomd_write, open_hoomd_write, read_hoomd_bonds, read_hoomd_structure, write_hoomd_bonds, write_hoomd_structure, and xml_data_block.

molfile_timestep_t hoomd_data_t::ts

Definition at line 223 of file hoomdplugin.c. Referenced by close_hoomd_read, read_hoomd_structure, read_hoomd_timestep, xml_data_block, and xml_new_tag.

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The documentation for this struct was generated from the following file:

• hoomdplugin.c

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