- o -
- Object()
: AtomMap
, BroadcastMgr
, CollectionMgr
, Node
, PatchMap
, ComputeMap
, PatchMgr
, ProxyMgr
, CollectionMaster
, ComputePmeCUDAMgr
, ReductionMgr
, Sync
, LdbCoordinator
- ObjectArena()
: ObjectArena< Type >
- ObjectOnPe()
: PatchMap
- occupancy()
: PDBAtom
- offset()
: Lattice
- offset_a()
: Lattice
- offset_b()
: Lattice
- offset_c()
: Lattice
- ofstream_namd()
: ofstream_namd
- okay()
: ConfigList
- one_device_per_node()
: DeviceCUDA
- oneAwayNeighbors()
: PatchMap
- oneOrTwoAwayNeighbors()
: PatchMap
- open()
: OwnerBox< Owner, Data >
, Box< Owner, Data >
, ofstream_namd
- openBoxesOnPe()
: CudaComputeNonbonded
- openSync()
: Sync
- operator bool()
: ofstream_namd
- operator const Real &()
: HashReal
- operator const T &()
: HashPoolAdaptorT< T >
- operator Real &()
: HashReal
- operator T &()
: HashPoolAdaptorT< T >
- operator!()
: ofstream_namd
- operator!=()
: idIndxStr
, ResizeArrayIter< Type >
, ResizeArrayPrimIter< T >
, UniqueSetIter< Type >
- operator()()
: cptr_sortop_priority
, sortop_x
, sortop_y
, sortop_z
, pe_sortop_bit_reversed
, pe_sortop_coord_x
, pe_sortop_coord_y
, TopoManagerWrapper::pe_sortop_topo
, patch_sortop_curve_a
, patch_sortop_curve_b
, patch_sortop_curve_c
, WorkDistrib::pe_sortop_diffuse
, WorkDistrib::pe_sortop_compact
, exlist_sortop
, pid_sortop_reverse_priority
, cr_sortop_distance
, cr_sortop_reverse_priority
, sortop_bit_reversed
, ijpair_sortop_bit_reversed
, pid_sortop_reverse_priority
, cr_sortop_distance
, cr_sortop_reverse_priority
, exlist_sortop
, atomID_less
, msm::GridFixed< T, N >
, msm::Grid< T >
- operator*()
: AVector
, ResizeArrayIter< Type >
, ResizeArrayPrimIter< T >
, UniqueSetIter< Type >
- operator*=()
: floatcomplex
, AVector
, MathArray< Elem, Size >
, Tensor
, Vector
- operator+()
: AVector
- operator++()
: ResizeArrayIter< Type >
, ResizeArrayPrimIter< T >
, UniqueSetIter< Type >
- operator+=()
: floatcomplex
, AVector
, MathArray< Elem, Size >
, C1Vector
, msm::GridFixed< T, N >
, msm::Grid< T >
, Tensor
, Vector
- operator-()
: AVector
- operator-=()
: MathArray< Elem, Size >
, Tensor
, Vector
- operator->()
: ResizeArrayIter< Type >
, UniqueSetIter< Type >
- operator/()
: AVector
- operator/=()
: AVector
, MathArray< Elem, Size >
, Tensor
, Vector
- operator<()
: pntChrgDist
, nodesort
, ComputeQMPntChrg
, idIndxStr
, lssDistSort
, qmSolvData
, LSSSubsDat
, meMMQMGrp
, TholeElem
, CudaComputeNonbonded::PatchRecord
, vmdforce
, HomePatchElem
, HydrogenGroupID
, InputAtom
, MovePatch
, Exclusion
, AngleElem
, ExclElem
, AnisoElem
, BondElem
, CrosstermElem
, DihedralElem
, GromacsPairElem
, PatchElem
, TuplePatchElem
, ImproperElem
- operator<<()
: datastream
- operator<=()
: WorkIndex
, msm::IndexRange
- operator=()
: ResizeArrayPrimIter< T >
, Array< Elem, Size >
, floatcomplex
, lssDistSort
, LSSSubsDat
, meMMQMGrp
, ALambdaControl
, AVector
, vmdforce
, Vector
, MathArray< Elem, Size >
, Matrix4
, msm::Array< T >
, proxyTreeNode
, Flags
, ResizeArrayIter< Type >
, UniqueSortedArray< Type >
, SortableResizeArray< Type >
, SortedArray< Type >
, UniqueSetRaw< Elem >
, AtomSignature
, UniqueSortedArray< Type >
, Tensor
, UniqueSet< Elem >
, UniqueSetIter< Type >
, Entry< Elem >
, Tensor
, ExclusionSignature
, TupleSignature
, HomePatchElem
, AGroup
, idIndxStr
- operator==()
: ResizeArrayPrimIter< T >
, UniqueSetIter< Type >
, nodesort
, TupleSignature
, Exclusion
, AtomSignature
, MovePatch
, CudaComputeNonbonded::PatchRecord
, idIndxStr
, ExclElem
, TholeElem
, qmSolvData
, ImproperElem
, BondElem
, ComputeQMPntChrg
, TaggedMsg
, vmdforce
, PatchElem
, DihedralElem
, TuplePatchElem
, BOID
, AngleElem
, BroadcastClientElem
, meMMQMGrp
, lssDistSort
, ExclusionSignature
, HomePatchElem
, ClusterCoorElem
, LSSSubsDat
, ClusterElem
, msm::Ivec
, ResizeArrayIter< Type >
, AnisoElem
, ProxyElem
, CrosstermElem
, GromacsPairElem
- operator[]()
: ResizeArray< T >
, msm::Array< T >
, AVector
, msm::Array< T >
, AGroup
, Vector
, Array< Elem, Size >
, HashPool< T >
, ResizeArray< T >
, Array< Elem, Size >
, ARestraintManager
, ALambdaManager
- optional()
: ParseOptions
- optionalB()
: ParseOptions
- order_init()
: PmePencil< T >
- origin()
: Lattice
, PatchMap
- ortho()
: Matrix4
- ortho2()
: Matrix4
- orthogonal()
: Lattice
- Out()
: AVector
- outerAdd()
: Tensor
- Output()
: AVector
- output()
: TupleSignature
- Output()
: Output
- output_stream()
: colvarproxy_namd
- outputExtendedSystem()
: Controller
- outputFepEnergy()
: Controller
- outputPatchComputeMaps()
: Node
- outputTiEnergy()
: Controller
- OwnerBox()
: OwnerBox< Owner, Data >