Fwd: Inquiry regarding benchmark simulations

From: David Hardy (dhardy_at_ks.uiuc.edu)
Date: Wed May 20 2020 - 17:15:38 CDT

Hi Barry, John,

Please help me out. Is there any licensing restriction on the F1 ATPase files located at http://www.ks.uiuc.edu/Research/namd/utilities/f1atpase/ <http://www.ks.uiuc.edu/Research/namd/utilities/f1atpase/> that prevents there use by people at D.E. Shaw as described below in the forwarded email? I'm thinking that they are intended to be freely available, but I wanted to make sure before responding.


David J. Hardy, Ph.D.
Beckman Institute
University of Illinois at Urbana-Champaign
405 N. Mathews Ave., Urbana, IL 61801
dhardy_at_ks.uiuc.edu, http://www.ks.uiuc.edu/~dhardy/
> Begin forwarded message:
> From: "Hezky, Jodi (DRDCON)" <jhezky_at_DEShawResearch.com>
> Subject: Inquiry regarding benchmark simulations
> Date: May 13, 2020 at 9:58:27 AM CDT
> To: "namd_at_ks.uiuc.edu" <namd_at_ks.uiuc.edu>
> Hello,
> I am writing on behalf of D. E. Shaw Research.  We have downloaded the f1aptase files publicly available here <http://www.ks.uiuc.edu/Research/namd/utilities/f1atpase/>, and have performed internal work on these files to convert them to our own file format (.dms).  I don’t see any license agreement associated with these files, so am writing to ask whether you can you please confirm that we are able to make these converted files publicly available under a Creative Commons 4.0 license?
> Please let me know if you have any questions.
> Best wishes,
> Jodi
> --------------------------------------------------------------------------- 
> Jodi Hezky, Ph.D. 
> D. E. Shaw Research 
> jhezky_at_DEShawResearch.com <mailto:jhezky_at_DEShawResearch.com> 
> T: 212.478.0308 
> F: 212.845.1308

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