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colvarproxy_system Member List
This is the complete list of members for
colvarproxy_system
, including all inherited members.
accelMD_enabled
() const
colvarproxy_system
[inline, virtual]
add_energy
(cvm::real energy)
colvarproxy_system
[virtual]
angstrom_to_internal
(cvm::real l) const
colvarproxy_system
[inline]
angstrom_value_
colvarproxy_system
[protected]
apply_force_dE_dlambda
(cvm::real *force)
colvarproxy_system
[virtual]
boltzmann
() const
colvarproxy_system
[inline]
boltzmann_
colvarproxy_system
[protected]
boundaries_non_periodic
enum value
colvarproxy_system
[protected]
boundaries_pbc_ortho
enum value
colvarproxy_system
[protected]
boundaries_pbc_triclinic
enum value
colvarproxy_system
[protected]
boundaries_type
colvarproxy_system
[protected]
Boundaries_type
enum name
colvarproxy_system
[protected]
boundaries_unsupported
enum value
colvarproxy_system
[protected]
cached_alch_lambda
colvarproxy_system
[protected]
cached_alch_lambda_changed
colvarproxy_system
[protected]
colvarproxy_system
()
colvarproxy_system
dt
()
colvarproxy_system
[virtual]
get_accelMD_factor
() const
colvarproxy_system
[inline, virtual]
get_alch_lambda
(cvm::real *lambda)
colvarproxy_system
[virtual]
get_d2E_dlambda2
(cvm::real *d2E_dlambda2)
colvarproxy_system
[virtual]
get_dE_dlambda
(cvm::real *dE_dlambda)
colvarproxy_system
[virtual]
get_molid
(int &molid)
colvarproxy_system
[virtual]
indirect_lambda_biasing_force
colvarproxy_system
internal_to_angstrom
(cvm::real l) const
colvarproxy_system
[inline]
kcal_mol_value_
colvarproxy_system
[protected]
position_distance
(cvm::atom_pos const &pos1, cvm::atom_pos const &pos2) const
colvarproxy_system
[virtual]
rand_gaussian
(void)
colvarproxy_system
[virtual]
reciprocal_cell_x
colvarproxy_system
[protected]
reciprocal_cell_y
colvarproxy_system
[protected]
reciprocal_cell_z
colvarproxy_system
[protected]
request_total_force
(bool yesno)
colvarproxy_system
[virtual]
reset_pbc_lattice
()
colvarproxy_system
send_alch_lambda
()
colvarproxy_system
[virtual]
set_alch_lambda
(cvm::real lambda)
colvarproxy_system
set_target_temperature
(cvm::real T)
colvarproxy_system
[virtual]
set_unit_system
(std::string const &units, bool check_only)
colvarproxy_system
[virtual]
target_temperature
() const
colvarproxy_system
[inline]
target_temperature_
colvarproxy_system
[protected]
total_force_requested
colvarproxy_system
[protected]
total_forces_enabled
() const
colvarproxy_system
[virtual]
total_forces_same_step
() const
colvarproxy_system
[virtual]
unit_cell_x
colvarproxy_system
[protected]
unit_cell_y
colvarproxy_system
[protected]
unit_cell_z
colvarproxy_system
[protected]
units
colvarproxy_system
update_pbc_lattice
()
colvarproxy_system
~colvarproxy_system
()
colvarproxy_system
[virtual]
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