apply_force(cvm::rvector const &new_force) const | colvarmodule::atom | [inline] |
atom() | colvarmodule::atom | |
atom(int atom_number) | colvarmodule::atom | |
atom(cvm::residue_id const &residue, std::string const &atom_name, std::string const &segment_id) | colvarmodule::atom | |
atom(atom const &a) | colvarmodule::atom | |
charge | colvarmodule::atom | |
grad | colvarmodule::atom | |
id | colvarmodule::atom | |
index | colvarmodule::atom | [protected] |
mass | colvarmodule::atom | |
operator=(atom const &a) | colvarmodule::atom | |
pos | colvarmodule::atom | |
read_position() | colvarmodule::atom | [inline] |
read_total_force() | colvarmodule::atom | [inline] |
read_velocity() | colvarmodule::atom | [inline] |
reset_data() | colvarmodule::atom | [inline] |
total_force | colvarmodule::atom | |
update_charge() | colvarmodule::atom | [inline] |
update_mass() | colvarmodule::atom | [inline] |
vel | colvarmodule::atom | |
~atom() | colvarmodule::atom |