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py_trans.C File Reference

#include "py_commands.h"
#include "VMDApp.h"
#include "CommandQueue.h"
#include "MoleculeList.h"
#include "Molecule.h"

Go to the source code of this file.

Functions

PyObject * py_rotate (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_translate (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_scale (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_get_center (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_get_scale (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_get_trans (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_get_rotation (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_set_center (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_set_scale (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_set_trans (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_set_rotation (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_resetview (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_is_fixed (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_fix (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_is_shown (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_show (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_drotate (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_dtranslate (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_dscale (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_dstrans (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_dgtrans (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * inittrans (void)

Variables

const char rotate_doc []

const char translate_doc []

const char scale_doc []

const char center_doc []

const char mol_scale_doc []

const char mol_trans_doc []

const char mol_rot_doc []

const char mcenter_doc []

const char mscale_doc []

const char mtrans_doc []

const char mrot_doc []

const char reset_doc []

const char fixed_doc []

const char setfix_doc []

const char show_doc []

const char setshow_doc []

PyMethodDef methods []

const char trans_moddoc []

Function Documentation

PyObject* inittrans ( void )

Definition at line 660 of file py_trans.C.
References methods, and trans_moddoc.

PyObject* py_dgtrans ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 607 of file py_trans.C.
References py_get_trans.

PyObject* py_drotate ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 579 of file py_trans.C.
References py_rotate.

PyObject* py_dscale ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 593 of file py_trans.C.
References py_scale.

PyObject* py_dstrans ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 600 of file py_trans.C.
References py_set_trans.

PyObject* py_dtranslate ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 586 of file py_trans.C.
References py_translate.

PyObject* py_fix ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 490 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::molecule_fix, VMDApp::moleculeList, and NULL.

PyObject* py_get_center ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 112 of file py_trans.C.
References Displayable::centt, get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, and NULL.

PyObject* py_get_rotation ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 228 of file py_trans.C.
References get_vmdapp, Matrix4::mat, mat, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, and Displayable::rotm.

PyObject* py_get_scale ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 156 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, and Displayable::scale.

PyObject* py_get_trans ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 184 of file py_trans.C.
References get_vmdapp, Displayable::globt, MoleculeList::mol_from_id, VMDApp::moleculeList, and NULL.
Referenced by py_dgtrans.

PyObject* py_is_fixed ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 460 of file py_trans.C.
References Displayable::fixed, get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, and result.

PyObject* py_is_shown ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 521 of file py_trans.C.
References Displayable::displayed, get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, and result.

PyObject* py_resetview ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 424 of file py_trans.C.
References get_vmdapp, MoleculeList::make_top, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, VMDApp::scene_resetview, and MoleculeList::top.

PyObject* py_rotate ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 32 of file py_trans.C.
References get_vmdapp, NULL, and VMDApp::scene_rotate_by.
Referenced by py_drotate.

PyObject* py_scale ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 87 of file py_trans.C.
References get_vmdapp, NULL, and VMDApp::scene_scale_by.
Referenced by py_dscale.

PyObject* py_set_center ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 271 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, Displayable::set_cent_trans, and z.

PyObject* py_set_rotation ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 363 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, num, and Displayable::set_rot.

PyObject* py_set_scale ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 302 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, and Displayable::set_scale.

PyObject* py_set_trans ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 332 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::moleculeList, NULL, Displayable::set_glob_trans, and z.
Referenced by py_dstrans.

PyObject* py_show ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 550 of file py_trans.C.
References get_vmdapp, MoleculeList::mol_from_id, VMDApp::molecule_display, VMDApp::moleculeList, and NULL.

PyObject* py_translate ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 64 of file py_trans.C.
References get_vmdapp, NULL, VMDApp::scene_translate_by, and z.
Referenced by py_dtranslate.

Variable Documentation

const char center_doc[] [static]

Initial value:
"Get the coordinates of the displayed center of a molecule\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (3-tuple of float) (x,y,z) coordinates of molecule center"

Definition at line 106 of file py_trans.C.

const char fixed_doc[] [static]

Initial value:
"Query if a molecule is fixed. Fixed molecules do not move when the scene\n" "or view is changed.\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (bool) True if molecule is fixed"

Definition at line 453 of file py_trans.C.

const char mcenter_doc[] [static]

Initial value:
"Set the center of an individual molecule\n\n" "Args:\n" " molid (int): Molecule ID to set center in\n" " center (list of 3 floats): (x, y, z) coordinates of new center"

Definition at line 266 of file py_trans.C.

PyMethodDef methods[] [static]

Initial value:
{ {"rotate_scene", (PyCFunction)py_rotate, METH_VARARGS | METH_KEYWORDS, rotate_doc}, {"translate_scene", (PyCFunction)py_translate, METH_VARARGS | METH_KEYWORDS, translate_doc}, {"scale_scene", (PyCFunction)py_scale, METH_VARARGS | METH_KEYWORDS, scale_doc}, {"resetview", (PyCFunction)py_resetview, METH_VARARGS | METH_KEYWORDS, reset_doc}, {"get_center", (PyCFunction)py_get_center, METH_VARARGS | METH_KEYWORDS, center_doc}, {"get_scale", (PyCFunction)py_get_scale, METH_VARARGS | METH_KEYWORDS, mol_scale_doc}, {"get_translation", (PyCFunction)py_get_trans, METH_VARARGS | METH_KEYWORDS, mol_trans_doc}, {"get_rotation", (PyCFunction)py_get_rotation, METH_VARARGS | METH_KEYWORDS, mol_rot_doc}, {"set_center", (PyCFunction)py_set_center, METH_VARARGS | METH_KEYWORDS, mcenter_doc}, {"set_scale", (PyCFunction)py_set_scale, METH_VARARGS | METH_KEYWORDS, mscale_doc}, {"set_translation", (PyCFunction)py_set_trans, METH_VARARGS | METH_KEYWORDS, mtrans_doc}, {"set_rotation", (PyCFunction)py_set_rotation, METH_VARARGS | METH_KEYWORDS, mrot_doc}, {"is_fixed", (PyCFunction)py_is_fixed, METH_VARARGS | METH_KEYWORDS, fixed_doc}, {"fix", (PyCFunction)py_fix, METH_VARARGS | METH_KEYWORDS, setfix_doc}, {"is_shown", (PyCFunction)py_is_shown, METH_VARARGS | METH_KEYWORDS, show_doc}, {"show", (PyCFunction)py_show, METH_VARARGS | METH_KEYWORDS, setshow_doc}, {"rotate", (PyCFunction)py_drotate, METH_VARARGS | METH_KEYWORDS, rotate_doc}, {"translate", (PyCFunction)py_dtranslate, METH_VARARGS | METH_KEYWORDS, translate_doc}, {"scale", (PyCFunction)py_dscale, METH_VARARGS | METH_KEYWORDS, scale_doc}, {"set_trans", (PyCFunction)py_dstrans, METH_VARARGS | METH_KEYWORDS, mtrans_doc}, {"get_trans", (PyCFunction)py_dgtrans, METH_VARARGS | METH_KEYWORDS, mol_trans_doc}, {NULL, NULL} }

Definition at line 614 of file py_trans.C.
Referenced by inittrans.

const char mol_rot_doc[] [static]

Initial value:
"Gets the rotation of a given molecule\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (16-tuple of float) Rotation matrix for molecule"

Definition at line 222 of file py_trans.C.

const char mol_scale_doc[] [static]

Initial value:
"Get the scaling factor for a molecule\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (float) Scaling factor for molecule"

Definition at line 150 of file py_trans.C.

const char mol_trans_doc[] [static]

Initial value:
"Get the translation for a molecule relative to scene center\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (3-tuple of float) (x, y, z) translation applied to molecule"

Definition at line 178 of file py_trans.C.

const char mrot_doc[] [static]

Initial value:
"Set the rotation of an individual molecule\n\n" "Args:\n" " molid (int): Molecule ID to set\n" " matrix (list or tuple of 16 floats): Rotation matrix to apply"

Definition at line 358 of file py_trans.C.

const char mscale_doc[] [static]

Initial value:
"Set the scale of an individual molecule\n\n" "Args:\n" " molid (int): Molecule ID to set scale of\n" " scale (float): New scale value for molecule"

Definition at line 297 of file py_trans.C.

const char mtrans_doc[] [static]

Initial value:
"Set the translation of an individual molecule\n\n" "Args:\n" " molid (int): Molecule ID to set translation of\n" " trans (list of 3 floats): New (x,y,z) translation for molecule"

Definition at line 327 of file py_trans.C.

const char reset_doc[] [static]

Initial value:
"Centers the view around a given molecule\n\n" "Args:\n" " molid (int): Molecule ID to center"

Definition at line 420 of file py_trans.C.

const char rotate_doc[] [static]

Initial value:
"Rotate the scene about an axis\n\n" "Args:\n" " axis (str): Axis to rotate around, either 'x', 'y', or 'z'\n" " angle (float): Angle to rotate by"

Definition at line 27 of file py_trans.C.

const char scale_doc[] [static]

Initial value:
"Set the scale or zoom level for the scene\n\n" "Args:\n" " scale (float): Scale value"

Definition at line 83 of file py_trans.C.

const char setfix_doc[] [static]

Initial value:
"Set the fixed status of a molecule. Fixed molecules do not move when the\n" "scene or view is changed.\n\n" "Args:\n" " molid (int): Molecule ID to set fixed status for\n" " fixed (bool): If molecule should be fixed"

Definition at line 484 of file py_trans.C.

const char setshow_doc[] [static]

Initial value:
"Set if a molecule is shown\n\n" "Args:\n" " molid (int): Molecule ID to show or hide\n" " shown (bool): True if molecule should be shown"

Definition at line 545 of file py_trans.C.

const char show_doc[] [static]

Initial value:
"Query if a molecule is shown\n\n" "Args:\n" " molid (int): Molecule ID to query\n" "Returns:\n" " (bool) True if molecule is shown"

Definition at line 515 of file py_trans.C.

const char trans_moddoc[] [static]

Initial value:
"Methods for manipulating the transformations applied to a molecule in the " "render window, including its position, rotation, center, and scale."

Definition at line 644 of file py_trans.C.
Referenced by inittrans.

const char translate_doc[] [static]

Initial value:
"Translate the scene by a vector\n\n" "Args:\n" " x (float): Amount to move in X direction\n" " y (float): Amount to move in Y direction\n" " z (float): Amount to move in Z direction"

Definition at line 58 of file py_trans.C.

Generated on Tue Apr 23 04:24:42 2024 for VMD (current) by

Functions
PyObject *	py_rotate (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_translate (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_scale (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_get_center (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_get_scale (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_get_trans (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_get_rotation (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_set_center (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_set_scale (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_set_trans (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_set_rotation (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_resetview (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_is_fixed (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_fix (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_is_shown (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_show (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_drotate (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_dtranslate (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_dscale (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_dstrans (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_dgtrans (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	inittrans (void)
Variables
const char	rotate_doc []
const char	translate_doc []
const char	scale_doc []
const char	center_doc []
const char	mol_scale_doc []
const char	mol_trans_doc []
const char	mol_rot_doc []
const char	mcenter_doc []
const char	mscale_doc []
const char	mtrans_doc []
const char	mrot_doc []
const char	reset_doc []
const char	fixed_doc []
const char	setfix_doc []
const char	show_doc []
const char	setshow_doc []
PyMethodDef	methods []
const char	trans_moddoc []