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py_label.C File Reference

#include "py_commands.h"
#include "VMDApp.h"
#include "GeometryList.h"
#include "Molecule.h"
#include "MoleculeList.h"
#include "config.h"

Go to the source code of this file.

Functions

PyObject * geom2dict (GeometryMol *g)

int dict2geom (PyObject *dict, GeometryMol *g)

PyObject * py_listall (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_label_add (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_label_visible (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_label_delete (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * getvalues (GeometryMol *g)

PyObject * py_label_getvalues (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_label_textsize (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * py_label_textthickness (PyObject *self, PyObject *args, PyObject *kwargs)

PyObject * initlabel (void)

Variables

const char listall_doc []

const char label_add_doc []

const char label_visible_doc []

const char label_del_doc []

const char label_values_doc []

const char label_size_doc []

const char label_thick_doc []

PyMethodDef LabelMethods []

const char label_moddoc []

Function Documentation

int dict2geom ( PyObject * dict,

GeometryMol * g

) [static]

Definition at line 63 of file py_label.C.
References as_int, GeometryMol::com_index, GeometryMol::items, and GeometryMol::obj_index.
Referenced by py_label_delete, py_label_getvalues, and py_label_visible.

PyObject* geom2dict ( GeometryMol * g ) [static]

Definition at line 29 of file py_label.C.
References as_pyint, GeometryMol::calculate, GeometryMol::com_index, Displayable::displayed, GeometryMol::items, n, NULL, GeometryMol::obj_index, and GeometryMol::ok.
Referenced by py_label_add, and py_listall.

PyObject* getvalues ( GeometryMol * g ) [static]

Definition at line 359 of file py_label.C.
References GeometryMol::calculate_all, GeometryMol::has_value, n, NULL, and ResizeArray::num.
Referenced by py_label_getvalues.

PyObject* initlabel ( void )

Definition at line 551 of file py_label.C.
References label_moddoc, and LabelMethods.

PyObject* py_label_add ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 158 of file py_label.C.
References as_int, geom2dict, GeometryList::geom_list, GeometryList::geom_list_index, VMDApp::geometryList, get_vmdapp, VMDApp::label_add, MoleculeList::mol_from_id, VMDApp::moleculeList, BaseMolecule::nAtoms, and NULL.

PyObject* py_label_delete ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 315 of file py_label.C.
References dict2geom, GeometryList::geom_list, GeometryList::geom_list_index, VMDApp::geometryList, get_vmdapp, VMDApp::label_delete, NULL, and ResizeArray::num.

PyObject* py_label_getvalues ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 404 of file py_label.C.
References dict2geom, GeometryList::geom_list, GeometryList::geom_list_index, VMDApp::geometryList, get_vmdapp, getvalues, NULL, ResizeArray::num, and result.

PyObject* py_label_textsize ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 450 of file py_label.C.
References get_vmdapp, VMDApp::label_get_text_size, VMDApp::label_set_text_size, and NULL.

PyObject* py_label_textthickness ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 491 of file py_label.C.
References get_vmdapp, VMDApp::label_get_text_thickness, VMDApp::label_set_text_thickness, and NULL.

PyObject* py_label_visible ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 268 of file py_label.C.
References dict2geom, GeometryList::geom_list, GeometryList::geom_list_index, VMDApp::geometryList, get_vmdapp, VMDApp::label_show, NULL, and ResizeArray::num.

PyObject* py_listall ( PyObject * self,

PyObject * args,

PyObject * kwargs

) [static]

Definition at line 108 of file py_label.C.
References geom2dict, GeometryList::geom_list, GeometryList::geom_list_index, VMDApp::geometryList, get_vmdapp, NULL, and ResizeArray::num.

Variable Documentation

const char label_add_doc[] [static]

Initial value:
"Add a label of the given type. If label already exists, no action is \n" "performed. The number of elements in the molids and atomids tuple is \n" "determined by\nArgs:\n" " category (str): Label category to add. Must be one of the following:\n" " 'Atoms', 'Bonds', 'Angles', 'Dihedrals', 'Springs'\n" " molids (list or tuple): Molids to label. Length as required to describe\n" " label category-- 1 for atoms, 2 bonds, etc.\n" " atomids (list or tuple): Atom IDs to label. Must be same length as molids\n" "Returns:\n" " (dict) Dictionary describing the label, can be used as input to other\n" " label module functions"

Definition at line 146 of file py_label.C.

const char label_del_doc[] [static]

Initial value:
"Delete a label\n\nArgs:\n" " label (dict): Label to delete. Dictionary format generated by label.add\n"

Definition at line 312 of file py_label.C.

const char label_moddoc[] [static]

Initial value:
"Methods to control the visibility and style of molecule labels"

Definition at line 537 of file py_label.C.
Referenced by initlabel.

const char label_size_doc[] [static]

Initial value:
"Sets text size for all labels.\n\n" "Args:\n" " size (float): Text size, optional. Must be greater than zero.\n" " If None, just returns size\n" "Returns:\n" " (float) Text size"

Definition at line 443 of file py_label.C.

const char label_thick_doc[] [static]

Initial value:
"Sets text thickness for all labels.\n\n" "Args:\n" " thickness (float): Thickness, optional. Must be greater than zero.\n" " If None, just returns thickness.\n" "Returns:\n" " (float) Text thickness"

Definition at line 484 of file py_label.C.

const char label_values_doc[] [static]

Initial value:
"Get label values for every frame in the molecule. 'value' refers to the " "quantity the label measures-- for example, bond labels give distance.\n\n" "Args:\n" " category (str): Label category to list, in ['atoms','bonds','dihedrals']\n" " label (dict): Label to query, from output of label.add\n" "Returns:\n" " (list of float) Label values for each frame in label, or None if\n" " label has no values, like atom labels."

Definition at line 395 of file py_label.C.

const char label_visible_doc[] [static]

Initial value:
"Sets a label to be visible\n\n" "Args:\n" " category (str): Label category, in ['atoms','bonds','dihedrals']\n" " label (dict): Label to show, from output of label.add or similar\n" " visible (bool): True to show, False to hide the label"

Definition at line 262 of file py_label.C.

PyMethodDef LabelMethods[] [static]

Initial value:
{ {"listall", (PyCFunction)py_listall, METH_VARARGS | METH_KEYWORDS, listall_doc }, {"add", (PyCFunction)py_label_add, METH_VARARGS | METH_KEYWORDS, label_add_doc }, {"set_visible", (PyCFunction)py_label_visible, METH_VARARGS | METH_KEYWORDS, label_visible_doc}, {"delete", (PyCFunction)py_label_delete, METH_VARARGS | METH_KEYWORDS, label_del_doc }, {"get_values", (PyCFunction)py_label_getvalues, METH_VARARGS | METH_KEYWORDS, label_values_doc}, {"text_size", (PyCFunction)py_label_textsize, METH_VARARGS | METH_KEYWORDS, label_size_doc}, {"text_thickness", (PyCFunction)py_label_textthickness, METH_VARARGS | METH_KEYWORDS, label_thick_doc}, {NULL, NULL} }

Definition at line 525 of file py_label.C.
Referenced by initlabel.

const char listall_doc[] [static]

Initial value:
"Get labels in the given label category.\n\n" "Args:\n" " category (str): Label category to list, in ['atoms','bonds','dihedrals']\n" "Returns:\n" " (dict): All labels, with keys 'molid', 'atomid', 'value', and 'on'.\n" " Molid and atomid will be tuples, value will be a float or None, and\n" " on will be True or False."

Definition at line 100 of file py_label.C.

Generated on Thu Apr 18 02:46:11 2024 for VMD (current) by

Functions
PyObject *	geom2dict (GeometryMol *g)
int	dict2geom (PyObject dict, GeometryMol g)
PyObject *	py_listall (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_label_add (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_label_visible (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_label_delete (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	getvalues (GeometryMol *g)
PyObject *	py_label_getvalues (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_label_textsize (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	py_label_textthickness (PyObject self, PyObject args, PyObject *kwargs)
PyObject *	initlabel (void)
Variables
const char	listall_doc []
const char	label_add_doc []
const char	label_visible_doc []
const char	label_del_doc []
const char	label_values_doc []
const char	label_size_doc []
const char	label_thick_doc []
PyMethodDef	LabelMethods []
const char	label_moddoc []