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CoorPluginData Class Reference

CoorPluginData: Uses a MolFilePlugin to load a coordinate file. More...

#include <CoorPluginData.h>

Inheritance diagram for CoorPluginData:

List of all members.

Public Methods
	CoorPluginData (const char *nm, Molecule *m, MolFilePlugin *, int is_input, int firstframe=-1, int framestride=-1, int lastframe=-1, const int *sel=NULL)
	~CoorPluginData ()
virtual CoorDataState	next (Molecule *m)
	read/write next coordinate set. Return state. More...
Protected Attributes
MolFilePlugin *	plugin
int	is_input
int	ts_page_align_sz
int	begFrame
int	frameSkip
int	endFrame
int	recentFrame
wkf_timerhandle	tm
long	kbytesperframe
long	totalframes
int *	selection
	If non-NULL, an array of atom indices to be written. More...

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Detailed Description

CoorPluginData: Uses a MolFilePlugin to load a coordinate file.

Definition at line 31 of file CoorPluginData.h.

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Constructor & Destructor Documentation

CoorPluginData::CoorPluginData (  const char *    nm, Molecule *    m, MolFilePlugin *   , int    is_input, int    firstframe = -1, int    framestride = -1, int    lastframe = -1, const int *    sel = NULL )

Definition at line 32 of file CoorPluginData.C. References begFrame, MolFilePlugin::can_read_pagealigned_timesteps, MolFilePlugin::can_write_structure, endFrame, frameSkip, is_input, kbytesperframe, BaseMolecule::nAtoms, MolFilePlugin::natoms, NULL, DrawMolecule::numframes, plugin, MolFilePlugin::read_timestep_pagealign_size, recentFrame, selection, MolFilePlugin::set_natoms, tm, totalframes, ts_page_align_sz, wkf_timer_create, wkf_timer_start, and MolFilePlugin::write_structure.

CoorPluginData::~CoorPluginData (    )

Definition at line 141 of file CoorPluginData.C. References NULL, plugin, selection, tm, and wkf_timer_destroy.

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Member Function Documentation

CoorData::CoorDataState CoorPluginData::next (  Molecule *    m )  [virtual]

read/write next coordinate set. Return state. Implements CoorData. Definition at line 153 of file CoorPluginData.C. References DrawMolecule::append_frame, begFrame, CoorData::CoorDataState, CoorData::DONE, endFrame, frameSkip, DrawMolecule::get_frame, kbytesperframe, MolFilePlugin::next, CoorData::NOTDONE, NULL, DrawMolecule::numframes, plugin, recentFrame, selection, MolFilePlugin::skip, tm, totalframes, ts_page_align_sz, wkf_timer_timenow, and MolFilePlugin::write_timestep.

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Member Data Documentation

int CoorPluginData::begFrame [protected]

Definition at line 36 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

int CoorPluginData::endFrame [protected]

Definition at line 36 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

int CoorPluginData::frameSkip [protected]

Definition at line 36 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

int CoorPluginData::is_input [protected]

Definition at line 34 of file CoorPluginData.h. Referenced by CoorPluginData.

long CoorPluginData::kbytesperframe [protected]

Definition at line 38 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

MolFilePlugin* CoorPluginData::plugin [protected]

Definition at line 33 of file CoorPluginData.h. Referenced by CoorPluginData, next, and ~CoorPluginData.

int CoorPluginData::recentFrame [protected]

Definition at line 36 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

int* CoorPluginData::selection [protected]

If non-NULL, an array of atom indices to be written. Definition at line 39 of file CoorPluginData.h. Referenced by CoorPluginData, next, and ~CoorPluginData.

wkf_timerhandle CoorPluginData::tm [protected]

Definition at line 37 of file CoorPluginData.h. Referenced by CoorPluginData, next, and ~CoorPluginData.

long CoorPluginData::totalframes [protected]

Definition at line 38 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

int CoorPluginData::ts_page_align_sz [protected]

Definition at line 35 of file CoorPluginData.h. Referenced by CoorPluginData, and next.

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The documentation for this class was generated from the following files:

• CoorPluginData.h
• CoorPluginData.C

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