- m -
- M_PI
: GoMolecule.C
, Molecule.C
, pub3dfft.C
, PmeBase.h
- MACHINE_PROGRESS
: WorkDistrib.C
- MAKE_PAIRLIST
: ComputeNonbondedCUDAKernel.cu
- MAP_FILE
: fixdcd.c
, flipbinpdb.c
, flipdcd.c
, loaddcd.c
, dumpdcd.c
- MASS_EPSILON
: HomePatch.C
- MATSWAP
: Matrix4.C
- MAX_ATOMTYPE_CHARS
: Parameters.h
- MAX_CONST_EXCLUSIONS
: CudaComputeNonbondedKernel.cu
, ComputeNonbondedCUDAKernel.h
- MAX_DEBUG_LEVEL
: Debug.h
- MAX_EXCLUSIONS
: ComputeNonbondedCUDAKernel.h
, CudaComputeNonbonded.h
- MAX_GO_CHAINS
: Molecule.h
- MAX_INTERNODE
: ProxyMgr.C
- MAX_MULTIPLICITY
: Parameters.h
- MAX_NEIGHBORS
: common.h
- MAX_NUM_DEVICES
: DeviceCUDA.C
- MAX_NUM_RANKS
: DeviceCUDA.C
- MAX_RESTRICTIONS
: Molecule.h
- MAX_SCRIPT_PARAM_SIZE
: Node.h
, SimParameters.C
- MAXHGS
: HomePatch.C
- MAXNEIGHBOUR
: RecBisection.h
- MERGEELECT
: ComputeNonbondedFEP.C
, ComputeNonbondedGo.C
, ComputeNonbondedLES.C
, ComputeNonbondedPProf.C
, ComputeNonbondedStd.C
, ComputeNonbondedTabEnergies.C
, ComputeNonbondedTI.C
, ComputeNonbondedFEP.C
- MERGEELECTNAME
: ComputeNonbondedBase.h
- MGRIDFORCEPARAMS_DEFAULTKEY
: MGridforceParams.h
- MIN_DEBUG_LEVEL
: Patch.C
, GlobalMasterTcl.C
, GlobalMasterSymmetry.C
, ReductionMgr.C
, ComputeGridForce.C
, GlobalMasterMisc.C
, ComputeHomePatch.C
, ComputeHomePatches.C
, ComputeMap.C
, GlobalMaster.C
, ComputeMgr.C
, ComputeMoa.C
, ComputeMsmSerial.C
, ComputePme.C
, ComputeNonbondedPair.C
, PatchMap.C
, ProxyPatch.C
, ComputeNonbondedSelf.C
, ComputePatch.C
, ComputePatchPair.C
, ComputeQM.C
, Controller.C
, Debug.h
, NamdOneTools.C
, GlobalMasterEasy.C
, ComputeGlobalMsgs.C
, ComputeGBISser.C
, ComputeFullDirect.C
, GlobalMasterFreeEnergy.C
, ComputeExt.C
, GlobalMasterIMD.C
, GlobalMasterServer.C
, GlobalMasterSMD.C
, ComputeDPME.C
, ScriptTcl.C
, BroadcastMgr.C
, ProxyMgr.C
, AtomMap.C
, Node.C
, Parameters.C
, MigrateAtomsMsg.C
, LdbCoordinator.C
, HomePatch.C
, GlobalMasterTest.C
, GlobalMasterTMD.C
, GoMolecule.C
, GromacsTopFile.C
, GridForceGrid.C
, Molecule.C
, MoleculeQM.C
, MStream.C
, Sequencer.C
, BroadcastClient.C
, PatchMgr.C
, Compute.C
, ComputeDPMEMsgs.C
, ComputeDPMTA.C
, WorkDistrib.C
, ComputeEwald.C
, Sync.C
, ComputeFmmSerial.C
- MKDIR
: SimParameters.C
, Output.C
- MODIFIED
: ComputeNonbondedBase.h
- MODULO
: PatchMap.inl
- MOLECULE2_C
: Molecule2.C
- MOLECULES
: GromacsTopFile.C
- MOLECULETAG
: common.h
- MOLECULETYPE
: GromacsTopFile.C
- MOVETO
: Controller.C
- MSM_C1VECTOR_MAX_BLOCK_SIZE
: MsmMap.h
- MSM_C1VECTOR_MAX_BLOCK_VOLUME
: MsmMap.h
- MSM_FIXED_SIZE_GRID_MSG
: ComputeMsm.C
- MSM_FOLD_FACTOR
: ComputeMsm.C
- MSM_GRID_CUTOFF_DECOMP
: ComputeMsm.C
- MSM_MAX_BLOCK_SIZE
: MsmMap.h
- MSM_MAX_BLOCK_VOLUME
: MsmMap.h
- MSM_MIGRATION
: MsmMap.h
- MSM_NODE_MAPPING
: ComputeMsm.C
- MSM_NODE_MAPPING_STATS
: ComputeMsm.C
- MSM_PRIORITY
: Priorities.h
- MSM_PROFILING
: ComputeMsm.C
- MSM_REDUCE_GRID
: ComputeMsm.C
- MSM_SKIP_BEYOND_SPHERE
: ComputeMsm.C
- MSM_SKIP_TOO_DISTANT_BLOCKS
: ComputeMsm.C
- MSM_TIMING
: ComputeMsm.C