| activate_menus() | VMDApp | |
| add_menu(VMDMenu *) | VMDApp | |
| anim | VMDApp | |
| animation_dir_name(int) | VMDApp | |
| animation_num_dirs() | VMDApp | |
| animation_num_styles() | VMDApp | |
| animation_set_dir(int) | VMDApp | |
| animation_set_frame(int frame) | VMDApp | |
| animation_set_speed(float) | VMDApp | |
| animation_set_stride(int) | VMDApp | |
| animation_set_style(int) | VMDApp | |
| animation_style_name(int) | VMDApp | |
| append_text(const char *str) | VMDApp | [inline, static] |
| argc_m | VMDApp | |
| argv_m | VMDApp | |
| atomSelParser | VMDApp | |
| axes | VMDApp | |
| axes_set_location(const char *) | VMDApp | |
| background_processing() | VMDApp | [inline] |
| background_processing_clear() | VMDApp | [inline] |
| background_processing_set() | VMDApp | [inline] |
| clear_text() | VMDApp | [inline, static] |
| color_add_item(const char *cat, const char *item, const char *defcolor) | VMDApp | |
| color_category(int) | VMDApp | |
| color_category_item(const char *category, int) | VMDApp | |
| color_change_name(const char *category, const char *colorname, const char *color) | VMDApp | |
| color_change_namelist(int numcols, char **category, char **colorname, char **color) | VMDApp | |
| color_change_rgb(const char *color, float r, float g, float b) | VMDApp | |
| color_change_rgblist(int numcols, const char **colors, float *rgb3fv) | VMDApp | |
| color_default_value(const char *colorname, float *r, float *g, float *b) | VMDApp | |
| color_get_from_name(const char *category, const char *colorname, const char **color) | VMDApp | |
| color_get_restype(const char *resname) | VMDApp | |
| color_index(const char *) | VMDApp | |
| color_mapping(const char *category, const char *item) | VMDApp | |
| color_name(int n) | VMDApp | |
| color_set_restype(const char *resname, const char *newtype) | VMDApp | |
| color_value(const char *colorname, float *r, float *g, float *b) | VMDApp | |
| colorscale_method_current() | VMDApp | |
| colorscale_method_index(const char *) | VMDApp | |
| colorscale_method_menuname(int) | VMDApp | |
| colorscale_method_name(int) | VMDApp | |
| colorscale_params(float *midpoint, float *min, float *max, int *rev, int *posterize) | VMDApp | |
| colorscale_setmethod(int method) | VMDApp | |
| colorscale_setparams(float midpoint, float min, float max, int rev, int posterize) | VMDApp | |
| commandQueue | VMDApp | |
| cpucaps | VMDApp | |
| cuda | VMDApp | |
| deactivate_uitext_stdin() | VMDApp | |
| depthcue_set_density(float) | VMDApp | |
| depthcue_set_end(float) | VMDApp | |
| depthcue_set_mode(const char *) | VMDApp | |
| depthcue_set_start(float) | VMDApp | |
| display | VMDApp | |
| display_get_screen_distance() | VMDApp | |
| display_get_screen_height() | VMDApp | |
| display_get_size(int *w, int *h) | VMDApp | |
| display_projection_is_perspective(void) | VMDApp | |
| display_set_aa(int onoff) | VMDApp | |
| display_set_ao(int onoff) | VMDApp | |
| display_set_ao_ambient(float a) | VMDApp | |
| display_set_ao_direct(float d) | VMDApp | |
| display_set_background_mode(int mode) | VMDApp | |
| display_set_cachemode(const char *mode) | VMDApp | |
| display_set_culling(int onoff) | VMDApp | |
| display_set_depthcue(int onoff) | VMDApp | |
| display_set_dof(int onoff) | VMDApp | |
| display_set_dof_fnumber(float f) | VMDApp | |
| display_set_dof_focal_dist(float d) | VMDApp | |
| display_set_eyesep(float sep) | VMDApp | |
| display_set_farclip(float amt, int isdelta) | VMDApp | |
| display_set_focallen(float flen) | VMDApp | |
| display_set_fps(int onoff) | VMDApp | |
| display_set_nearclip(float amt, int isdelta) | VMDApp | |
| display_set_position(int x, int y) | VMDApp | |
| display_set_projection(const char *proj) | VMDApp | |
| display_set_rendermode(const char *mode) | VMDApp | |
| display_set_screen_distance(float) | VMDApp | |
| display_set_screen_height(float) | VMDApp | |
| display_set_shadows(int onoff) | VMDApp | |
| display_set_size(int w, int h) | VMDApp | |
| display_set_stereo(const char *mode) | VMDApp | |
| display_set_stereo_swap(int onoff) | VMDApp | |
| display_titlescreen() | VMDApp | |
| display_update() | VMDApp | |
| display_update_on(int) | VMDApp | |
| display_update_status() | VMDApp | |
| display_update_ui() | VMDApp | |
| exitFlag | VMDApp | |
| filerender_aasamples(const char *method, int aasamples) | VMDApp | |
| filerender_aosamples(const char *method, int aosamples) | VMDApp | |
| filerender_aspectratio(const char *method, float *aspect) | VMDApp | |
| filerender_cur_format(const char *method) | VMDApp | |
| filerender_default_filename(const char *method) | VMDApp | |
| filerender_default_option(const char *method) | VMDApp | |
| filerender_get_format(const char *method, int i) | VMDApp | |
| filerender_has_antialiasing(const char *method) | VMDApp | |
| filerender_has_imagesize(const char *method) | VMDApp | |
| filerender_imagesize(const char *method, int *imgwidth, int *imgheight) | VMDApp | |
| filerender_name(int n) | VMDApp | |
| filerender_num() | VMDApp | |
| filerender_numformats(const char *method) | VMDApp | |
| filerender_option(const char *method, const char *option) | VMDApp | |
| filerender_prettyname(int n) | VMDApp | |
| filerender_render(const char *method, const char *filename, const char *extcmd) | VMDApp | |
| filerender_set_format(const char *method, const char *format) | VMDApp | |
| filerender_shortname_from_prettyname(const char *pretty) | VMDApp | |
| filerender_valid(const char *method) | VMDApp | |
| fps | VMDApp | |
| geometryList | VMDApp | |
| get_colorscale_colors(int whichScale, float min[3], float mid[3], float max[3]) | VMDApp | |
| get_eofexit() | VMDApp | [inline] |
| get_plugin(const char *type, const char *name) | VMDApp | |
| get_repserialnum(void) | VMDApp | [static] |
| get_texserialnum(void) | VMDApp | [static] |
| get_text() | VMDApp | [inline, static] |
| guess_filetype(const char *filename) | VMDApp | |
| highlighted_molid | VMDApp | |
| highlighted_rep | VMDApp | |
| imd_connect(int molid, const char *host, int port) | VMDApp | |
| imd_connected(int molid) | VMDApp | |
| imd_disconnect(int molid) | VMDApp | |
| imd_sendforces(int, const int *, const float *) | VMDApp | |
| imdMgr | VMDApp | |
| label_add(const char *category, int num_ids, const int *molids, const int *atomids, const int *cells, float k, int toggle) | VMDApp | |
| label_delete(const char *category, int n) | VMDApp | |
| label_get_text_size() const | VMDApp | |
| label_get_text_thickness() const | VMDApp | |
| label_set_text_size(float) | VMDApp | |
| label_set_text_thickness(float) | VMDApp | |
| label_set_textformat(const char *nm, int n, const char *format) | VMDApp | |
| label_set_textoffset(const char *nm, int n, float x, float y) | VMDApp | |
| label_show(const char *category, int n, int onoff) | VMDApp | |
| light_highlight(int lightnum, int onoff) | VMDApp | |
| light_move(int lightnum, const float *newpos) | VMDApp | |
| light_on(int lightnum, int onoff) | VMDApp | |
| light_rotate(int lightnum, float amt, char axis) | VMDApp | |
| list_plugins(PluginList &, const char *type=NULL) | VMDApp | |
| logfile_read(const char *path) | VMDApp | |
| material_add(const char *name, const char *copyfrom) | VMDApp | |
| material_change(const char *name, int property, float val) | VMDApp | |
| material_delete(const char *name) | VMDApp | |
| material_rename(const char *oldname, const char *newname) | VMDApp | |
| material_restore_default(int) | VMDApp | |
| materialList | VMDApp | |
| menu_add_extension(const char *shortname, const char *menu_path) | VMDApp | |
| menu_id(const char *name) | VMDApp | |
| menu_location(const char *name, int &x, int &y) | VMDApp | |
| menu_move(const char *name, int x, int y) | VMDApp | |
| menu_name(int) | VMDApp | |
| menu_remove_extension(const char *shortname) | VMDApp | |
| menu_select_mol(const char *name, int molno) | VMDApp | |
| menu_show(const char *name, int on) | VMDApp | |
| menu_status(const char *name) | VMDApp | |
| mobile_get_APIsupported() | VMDApp | |
| mobile_get_client_list(ResizeArray< JString * > *&nick, ResizeArray< JString * > *&ip, ResizeArray< bool > *&active) | VMDApp | |
| mobile_get_mode() | VMDApp | |
| mobile_get_network_port() | VMDApp | |
| mobile_get_tracker_status(float &tx, float &ty, float &tz, float &rx, float &ry, float &rz, int &buttons) | VMDApp | |
| mobile_network_port(int port) | VMDApp | |
| mobile_sendMsg(const char *nick, const char *ip, const char *msgType, const char *msg) | VMDApp | |
| mobile_set_activeClient(const char *nick, const char *ip) | VMDApp | |
| mobile_set_mode(int mode) | VMDApp | |
| molecule_activate(int molid, int onoff) | VMDApp | |
| molecule_add_instance(int molid, Matrix4 &inst) | VMDApp | |
| molecule_add_volumetric(int molid, const char *dataname, const float origin[3], const float xaxis[3], const float yaxis[3], const float zaxis[3], int xsize, int ysize, int zsize, float *datablock) | VMDApp | |
| molecule_add_volumetric(int molid, const char *dataname, const double origin[3], const double xaxis[3], const double yaxis[3], const double zaxis[3], int xsize, int ysize, int zsize, float *datablock) | VMDApp | |
| molecule_addrep(int molid) | VMDApp | |
| molecule_bondsrecalc(int molid) | VMDApp | |
| molecule_cancel_io(int molid) | VMDApp | |
| molecule_delete(int molid) | VMDApp | |
| molecule_delete_all(void) | VMDApp | |
| molecule_delete_all_instances(int molid) | VMDApp | |
| molecule_deleteframes(int molid, int first, int last, int stride) | VMDApp | |
| molecule_display(int molid, int onoff) | VMDApp | |
| molecule_dupframe(int molid, int frame) | VMDApp | |
| molecule_fix(int molid, int onoff) | VMDApp | |
| molecule_frame(int molid) | VMDApp | |
| molecule_from_selection_list(const char *name, int mergemode, int numsels, AtomSel **, int docallbacks=1) | VMDApp | |
| molecule_get_color() | VMDApp | |
| molecule_get_material() | VMDApp | |
| molecule_get_selection() | VMDApp | |
| molecule_get_style() | VMDApp | |
| molecule_id(int) | VMDApp | |
| molecule_index_from_id(int molid) | VMDApp | |
| molecule_is_active(int molid) | VMDApp | |
| molecule_is_displayed(int molid) | VMDApp | |
| molecule_is_fixed(int molid) | VMDApp | |
| molecule_load(int molid, const char *filename, const char *filetype, const FileSpec *spec) | VMDApp | |
| molecule_make_top(int molid) | VMDApp | |
| molecule_modrep(int molid, int repid) | VMDApp | |
| molecule_name(int molid) | VMDApp | |
| molecule_new(const char *name, int natoms, int docallbacks=1) | VMDApp | |
| molecule_num_instances(int molid) | VMDApp | |
| molecule_numatoms(int molid) | VMDApp | |
| molecule_numframes(int molid) | VMDApp | |
| molecule_orblocalize(int molid, int waveid) | VMDApp | |
| molecule_reanalyze(int molid) | VMDApp | |
| molecule_rename(int molid, const char *newname) | VMDApp | |
| molecule_savetrajectory(int molid, const char *filename, const char *filetype, const FileSpec *spec) | VMDApp | |
| molecule_set_color(const char *color) | VMDApp | |
| molecule_set_dataset_flag(int molid, const char *dataflagstr, int setval) | VMDApp | |
| molecule_set_material(const char *material) | VMDApp | |
| molecule_set_selection(const char *selection) | VMDApp | |
| molecule_set_style(const char *style) | VMDApp | |
| molecule_ssrecalc(int molid) | VMDApp | |
| molecule_top() | VMDApp | |
| molecule_valid_id(int molid) | VMDApp | |
| moleculeList | VMDApp | |
| molrep_delete(int molid, int repid) | VMDApp | |
| molrep_get_by_name(int molid, const char *) | VMDApp | |
| molrep_get_clipplane(int molid, int repid, int clipid, float *center, float *normal, float *color, int *mode) | VMDApp | |
| molrep_get_color(int molid, int repid) | VMDApp | |
| molrep_get_colorupdate(int molid, int repid) | VMDApp | |
| molrep_get_drawframes(int molid, int repid) | VMDApp | |
| molrep_get_instances(int molid, int repid) | VMDApp | |
| molrep_get_material(int molid, int repid) | VMDApp | |
| molrep_get_name(int molid, int repid) | VMDApp | |
| molrep_get_pbc(int molid, int repid) | VMDApp | |
| molrep_get_pbc_images(int molid, int repid) | VMDApp | |
| molrep_get_scaleminmax(int molid, int repid, float *min, float *max) | VMDApp | |
| molrep_get_selection(int molid, int repid) | VMDApp | |
| molrep_get_selupdate(int molid, int repid) | VMDApp | |
| molrep_get_smoothing(int molid, int repid) | VMDApp | |
| molrep_get_style(int molid, int repid) | VMDApp | |
| molrep_is_shown(int molid, int repid) | VMDApp | |
| molrep_numselected(int molid, int repid) | VMDApp | |
| molrep_reset_scaleminmax(int molid, int repid) | VMDApp | |
| molrep_set_clipcenter(int molid, int repid, int clipid, const float *center) | VMDApp | |
| molrep_set_clipcolor(int molid, int repid, int clipid, const float *color) | VMDApp | |
| molrep_set_clipnormal(int molid, int repid, int clipid, const float *normal) | VMDApp | |
| molrep_set_clipstatus(int molid, int repid, int clipid, int onoff) | VMDApp | |
| molrep_set_color(int molid, int repid, const char *color) | VMDApp | |
| molrep_set_colorupdate(int molid, int repid, int onoff) | VMDApp | |
| molrep_set_drawframes(int molid, int repid, const char *framesel) | VMDApp | |
| molrep_set_instances(int molid, int repid, int inst) | VMDApp | |
| molrep_set_material(int molid, int repid, const char *material) | VMDApp | |
| molrep_set_pbc(int molid, int repid, int pbc) | VMDApp | |
| molrep_set_pbc_images(int molid, int repid, int n) | VMDApp | |
| molrep_set_scaleminmax(int molid, int repid, float min, float max) | VMDApp | |
| molrep_set_selection(int molid, int repid, const char *selection) | VMDApp | |
| molrep_set_selupdate(int molid, int repid, int onoff) | VMDApp | |
| molrep_set_smoothing(int molid, int repid, int n) | VMDApp | |
| molrep_set_style(int molid, int repid, const char *style) | VMDApp | |
| molrep_show(int molid, int repid, int onff) | VMDApp | |
| mouse_set_mode(int mode, int setting) | VMDApp | |
| next_molid() | VMDApp | [inline] |
| nodecount | VMDApp | |
| nodename | VMDApp | |
| noderank | VMDApp | |
| num_clipplanes() | VMDApp | |
| num_color_categories() | VMDApp | |
| num_color_category_items(const char *category) | VMDApp | |
| num_colors() | VMDApp | |
| num_colorscale_methods() | VMDApp | |
| num_menus() | VMDApp | |
| num_molecules() | VMDApp | |
| num_molreps(int molid) | VMDApp | |
| num_regular_colors() | VMDApp | |
| nvenc | VMDApp | |
| par_barrier() | VMDApp | |
| par_name() | VMDApp | [inline] |
| par_rank() | VMDApp | [inline] |
| par_size() | VMDApp | [inline] |
| pickList | VMDApp | |
| pickModeList | VMDApp | |
| plugin_dlopen(const char *filename) | VMDApp | |
| plugin_update() | VMDApp | |
| qsurf | VMDApp | |
| remove_menu(const char *) | VMDApp | |
| ResetViewPending | VMDApp | |
| save_state() | VMDApp | |
| scene | VMDApp | |
| scene_resetview() | VMDApp | |
| scene_resetview_newmoldata() | VMDApp | |
| scene_rock(char axis, float step, int nsteps=0) | VMDApp | |
| scene_rockoff() | VMDApp | |
| scene_rotate_by(float angle, char axis, float incr=0) | VMDApp | |
| scene_rotate_by(const float *) | VMDApp | |
| scene_rotate_to(float angle, char axis) | VMDApp | |
| scene_rotate_to(const float *) | VMDApp | |
| scene_scale_by(float s) | VMDApp | |
| scene_scale_to(float s) | VMDApp | |
| scene_stoprotation() | VMDApp | |
| scene_translate_by(float x, float y, float z) | VMDApp | |
| scene_translate_to(float x, float y, float z) | VMDApp | |
| set_colorscale_colors(int whichScale, const float min[3], const float mid[3], const float max[3]) | VMDApp | |
| set_eofexit(int onoff) | VMDApp | [inline] |
| set_mouse_callbacks(int on) | VMDApp | |
| set_mouse_rocking(int on) | VMDApp | |
| set_text(const char *str) | VMDApp | [inline, static] |
| show_stride_message() | VMDApp | |
| spaceball_get_tracker_status(float &tx, float &ty, float &tz, float &rx, float &ry, float &rz, int &buttons) | VMDApp | |
| spaceball_set_mode(int mode) | VMDApp | |
| spaceball_set_null_region(int nr) | VMDApp | |
| spaceball_set_sensitivity(float s) | VMDApp | |
| stage | VMDApp | |
| stage_set_location(const char *) | VMDApp | |
| stage_set_numpanels(int) | VMDApp | |
| stage_set_size(float) | VMDApp | |
| textinterp_change(const char *interpname) | VMDApp | |
| thrpool | VMDApp | |
| tool_change_type(int toolnum, const char *type) | VMDApp | |
| tool_create(const char *type, int argc, const char **argv) | VMDApp | |
| tool_delete(int toolnum) | VMDApp | |
| tool_set_force_scale(int toolnum, float newval) | VMDApp | |
| tool_set_position_scale(int toolnum, float newval) | VMDApp | |
| tool_set_spring_scale(int toolnum, float newval) | VMDApp | |
| uiText | VMDApp | |
| uivr | VMDApp | |
| uivs | VMDApp | |
| UpdateDisplay | VMDApp | |
| userKeyDesc | VMDApp | |
| userKeys | VMDApp | |
| vmd_choose_file(const char *title, const char *extension, const char *extension_label, int do_save) | VMDApp | |
| VMDApp(int argc, char **argv, int mpion) | VMDApp | |
| vmdcollab | VMDApp | |
| VMDexit(const char *exitmsg, int exitcode, int pauseseconds) | VMDApp | |
| VMDinit(int, char **, const char *, int *dispLoc, int *dispSize) | VMDApp | |
| VMDupdate(int) | VMDApp | |
| vs_connect(const char *host, int port) | VMDApp | |
| vs_connected() | VMDApp | |
| vs_disconnect() | VMDApp | |
| ~VMDApp() | VMDApp | |
