adding peptide constraint in NAMD configuration file

From: soodabeh ghaffari (
Date: Tue Mar 03 2020 - 22:49:20 CST

Dear Sir/Madam,
I have a pdb file in which two residues are not connected and their
distances are greater than peptide bond. I want to do MD simulation and add
constraint to MD.conf so that their distance should be with peptide bond
and I have a connected pdb file at the end.
Can you help me? which constraint should I have use and how?
Do you have any example?
Best Regards,

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