RE: Which Binary to use?

From: Norman Geist (
Date: Mon Apr 27 2015 - 01:59:17 CDT



well "didn't work" is a quite poor descritption of your problem.


What hardware does the nodes have? (cat /proc/cpuinfo)

What network does it have? (Ethernet,Infiniband)

What have you tried and what was the output?


Norman Geist.


From: [] On Behalf
Of Sourav Ray
Sent: Friday, April 24, 2015 7:46 AM
To:; Arijit Ghosh
Subject: Re: namd-l: Which Binary to use?


if you have multiple nodes try TCP else single node, multiprocessor one
should be fine.


On Fri, Apr 24, 2015 at 10:40 AM, Arijit Ghosh <>



Recently we have got access to Linux based HPC cluster having 512 nodes.
Which build of NAMD to use and how to make it work. I tried the Intel/AMD 64
bit version, didn't work.


Please help.





Arijit Ghosh
4th Year Integrated MSc.
School of Biological Sciences
National Institute of Science Education and Research
Bhubaneswar, Orissa-751005, India
Alternate electronic contact:
Handheld: +91-986-171-9393

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