Re: compiled namd on clustermatic fails !

From: AMIT PALIWAL (paliwal_at_jhu.edu)
Date: Thu Jul 29 2004 - 19:24:52 CDT

Guys,
a correction: in the second case below we do supply nodelist filename after ++nodelist. So the error is not due to my typo in the previous email.
thanks,
Amit.

> Hi,
> I can not get either precompiled binary or locally compiled
> charmrun+namd to run on clustrmatic cluster.
>
> When I try :
>
> ./charmrun ++skipmaster ++startpe 122 +p1 ++verbose ./namd2 src/alanin
> it runs fine...
>
> but when it is run through nodelist then it simply fials to run
> and in fact tries to connect
> toi wrong nodes:
>
> ./charmrun ++skipmaster ++nodelist +p2 ++verbose ./namd2
> src/alanin
>
> produces output:
>
> Charmrun> charmrun started...
> Charmrun> adding client 0: "0", IP:10.0.0.1
> Charmrun> There are 0 slave nodes available.
> Charmrun> Charmrun = 10.0.0.250, port = 41124
> Charmrun> start node program on slave node: 0.
> Charmrun> node programs all started
> Charmrun> Waiting for 0-th client to connect.
>
>
> I think the problem might be in the nodelist format. I used the
> following:
> group main
> host 122
> host 126
> where 122 and 126 were the nodes assigned to me.
>
> -Amit
>
> PS: Is charm source compatible with clustermatic 4.0 ??
>
>
>
>
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>
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