question about using Amber force field in namd

Date: Wed Jun 02 2004 - 09:35:54 CDT

Dear all,

I am trying to use Amber force field in NAMD. After reading the User's
manual, I am still not quite clear about how to do that. So I am
wondering if there are some sample inputs for generating PSF file,
minimization, etc. I have some experience on using NAMD with Charmm
force field. What's the difference between using Amber and using Charmm
in NAMD?

Thanks a lot!


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