output warning in using namd2 "Warning: Not all atoms have unique coordinates."

From: Jerry Ebalunode (jebalunode_at_UH.EDU)
Date: Tue Sep 16 2003 - 13:44:49 CDT

Hi all,
I just compiled namd2.5b2 on an itanium2 cluster that uses SCALI's
implementation of the mpi. When I run the binary, I always get this warning
"Warning: Not all atoms have unique coordinates." in the output log. Does
anyone know how to correct this problem? I initially thought it had to do
with the tcl or fftw libraries I was using, so used the precompiled
libraries from http://www.ks.uiuc.edu/Research/namd/libraries/ meant for my
architecture. However, after recompiling and running namd2 I still had the
same problems.

Compiler information
intel C/C++ compiler for itanium ecc version 7.1

Jerry Ebalunode
Graduate Research Assistant
RM 402F Houston Science Center
Phone: 713-743-8367
Dept. of Biology and Biochemistry
University of Houston.
4800 Calhoun Road
Houston, TX 77204

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