Re: MD simulation

From: Pratik Narain Srivastava (pratik.narain_at_gmail.com)
Date: Sun Aug 08 2021 - 02:15:35 CDT

Post your conf files for all 3 runs. You seem to have overwritten your
files.

On Sun, 8 Aug, 2021, 12:44 pm Ruturaj warake, <ruturajwarake47_at_gmail.com>
wrote:

> Dear users,
> I am running normal protein ligand docked complex simulation.
> I have less computer configuration so I did 10 ns run first. Then I again
> did 10 ns and so on till 30 ns by changing the inputname and outputname in
> production.inp file.
> But as I am seeing now, production.dcd file is being smaller in size (kB)
> after every run.
> So I am not sure whether it works or not. Whether I can achieve 30 ns or I
> am repeating same 10 ns again and again ? Please guide me for the same.
>
> Ruturaj Warake,
> Niper, Hyderabad
>

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