Re: difference between run and minimize

From: snoze pa (snoze.pa_at_gmail.com)
Date: Wed Sep 14 2011 - 10:02:03 CDT

Dear NAMD users,

 Still i am confused about the run and minimize command. In order to
minimize a protein do I have to supply the run command also?

Thanks in advance
S

On Fri, Sep 9, 2011 at 4:01 PM, snoze pa <snoze.pa_at_gmail.com> wrote:

> Dear NAMD users,
>
> What is the difference between minimize =1000 and run=1000
>
> Most of the NAMD tutorials uses both minimize and run to minimize a
> protien.
>
> Thats strang?
>
> thanks in advance
> S
>

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