Re: difference between run and minimize

From: snoze pa (snoze.pa_at_gmail.com)
Date: Wed Sep 14 2011 - 10:05:56 CDT

Please discard my previous messages, It was my fault not to read manual
correctly. Sorry for the inconvenience.

On Wed, Sep 14, 2011 at 10:02 AM, snoze pa <snoze.pa_at_gmail.com> wrote:

> Dear NAMD users,
>
> Still i am confused about the run and minimize command. In order to
> minimize a protein do I have to supply the run command also?
>
> Thanks in advance
> S
>
> On Fri, Sep 9, 2011 at 4:01 PM, snoze pa <snoze.pa_at_gmail.com> wrote:
>
>> Dear NAMD users,
>>
>> What is the difference between minimize =1000 and run=1000
>>
>> Most of the NAMD tutorials uses both minimize and run to minimize a
>> protien.
>>
>> Thats strang?
>>
>> thanks in advance
>> S
>>
>
>

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