Re: Regarding system forces in NAMD

From: sruthi c k (
Date: Thu Jan 07 2016 - 09:13:57 CST

Hi Jerome,
Thanks for your quick reply.
I am looking at radius of gyration of protein. Hide Jacobian is not
activated. Can we have that option even if we are not doing ABF? I thought
it is an option given for ABF. My simulation is UNBIASED.

On Thu, Jan 7, 2016 at 8:07 PM, Jérôme Hénin <> wrote:

> Hi Sruthi,
> If you are looking at a radius of gyration, keep in mind that that
> coordinate experiences a strong Jacobian force especially at small values--001a11408c4475bcd80528bfebd5--

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