Re: charm36 for ATP and MG

From: Julian Gamboa (laboratorio.superconductividad_at_gmail.com)
Date: Tue Sep 08 2015 - 11:19:03 CDT

 description please!

2015-09-08 13:13 GMT-03:00 Josh Vermaas <vermaas2_at_illinois.edu>:

> What was the script and what was the error message? Right now, there is no
> possible way for us to help you, as we don't have a sufficient description
> for what you did.
> -Josh Vermaas
>
>
> On 09/08/2015 12:55 AM, Radhika Anoop wrote:
>
> Hi,
>
> I am using NAMD to simulate a protein with ATP and MG.I want to use
> CHARM36 forcefileds. The topology files I found were top_all36_prot.rtf and
> a stream file toppar_all36_na_nad_ppi.str for ATP. Unfortunately I am not
> able to generate PSF files. When I mentioned two topology files in NAMD
> script , error came because of more than one argument. Can anybody help me
> to find the the proper way to do psf generation for protein with ATP and MG?
>
> Thanks,
> Radhika
>
>
>

-- 
...Julián Niño....

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