Re: angle between 2 vectors as collective variable

From: Vlad Cojocaru (vlad.cojocaru_at_mpi-muenster.mpg.de)
Date: Thu Mar 26 2015 - 10:03:36 CDT

As distance vectors from positions ...

Vlad

On March 26, 2015 3:58:26 PM CET, Giacomo Fiorin <giacomo.fiorin_at_gmail.com> wrote:
>Hello Vlad, it depends on how the two vectors are being calculated
>from,
>e.g. as distance vectors between two positions or axes of rotation.
>
>Giacomo
>
>On Thu, Mar 26, 2015 at 10:17 AM, Vlad Cojocaru <
>vlad.cojocaru_at_mpi-muenster.mpg.de> wrote:
>
>> Dear all,
>>
>> This might be a trivial question but somehow I am not able to find an
>> answer to it. Is it possible to define the angle between 2 vectors as
>> collective variable within the COLVAR module ?
>>
>> Thanks for any tips
>>
>> Best wishes
>> Vlad
>>
>> --
>> Dr. Vlad Cojocaru
>> Computational Structural Biology Laboratory
>> Department of Cell and Developmental Biology
>> Max Planck Institute for Molecular Biomedicine
>> Röntgenstrasse 20, 48149 Münster, Germany
>> Tel: +49-251-70365-324; Fax: +49-251-70365-399
>> Email: vlad.cojocaru[at]mpi-muenster.mpg.de
>> http://www.mpi-muenster.mpg.de/43241/cojocaru
>>
>>
>
>
>--
>Giacomo Fiorin
>Assistant Professor of Research
>Institute for Computational Molecular Science (ICMS)
>College of Science and Technology, Temple University
>1925 North 12th Street (035-07), Room 704D
>Philadelphia, PA 19122-1801
>Phone: +1-215-204-4213
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>http://giacomofiorin.github.io/

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