single strand DNA in hairpin conformation

From: Urszula Uciechowska (urszula.uciechowska_at_biotech.ug.edu.pl)
Date: Thu Feb 12 2015 - 03:14:55 CST

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Hi namd users,

Does anyone know how to build a ssDNA in hairpin conformation?
Does anyone know maybe other software where I could do this?

Thank you in advance for any suggestions

Best regards
Urszula

University of Gdansk and Medical Univesity of Gdansk
Department of Molecular and Cellular Biology
ul. Kladki 24
80-822 Gdansk
Poland

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http://www.ug.edu.pl/

Next message: Christian Jorgensen: "PSF generated with PSFGEN [problem in CP2K] - Problem with CGenFF naming?"
Previous message: Tristan Croll: "Re: GBIS in NAMD 2.10 CUDA with IMD"
In reply to: JAVAD NOROOZI: "LangevinPistonPeriod (Simulation Near Critical Point)"
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