From: Himani Raina (himaniraina070_at_gmail.com)
Date: Fri Apr 12 2013 - 02:02:17 CDT
I am trying to minimze a membrane protein alone without the solvent for
1000 steps and when I open the log file I get the error minimizer slowly
moving "n" atoms with bad contacts for the first 25 steps and it shows
different value for n each time . I tried doing the minimization at 10000
steps also same error was reported. and when I further did equilibration
error was atoms moving too fast .
Please help me in this matter .
-- Thanks And Regards Himani Raina
This archive was generated by hypermail 2.1.6 : Tue Dec 31 2013 - 23:23:08 CST