From: Aron Broom (broomsday_at_gmail.com)
Date: Fri Jun 15 2012 - 16:18:22 CDT
when you do a run, have:
binaryoutput yes
in the config file.
Then your coor, vel, and dcd files will be binary.
On Fri, Jun 15, 2012 at 4:43 PM, Carlos Sosa <sosa0006_at_r.umn.edu> wrote:
>
> Hello,
>
> Any information on how to obtain binary format representation for the
> coordinates?
>
> From the NAMD wiki:
>
> III. obtain a binary format representation of your coordinates. The
> coordinate output file of a non memory optimized run would work. Or extract
> the binary coordinates using VMD.
>
> IV. replace "coordinates" with "bincoordinates" and replace the reference
> to the pdb file with a file containing binary format coordinates.
> Thanks
>
-- Aron Broom M.Sc PhD Student Department of Chemistry University of Waterloo
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