Re: AMBER in NAMD

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Thu Sep 20 2012 - 11:26:05 CDT

On Thu, Sep 20, 2012 at 6:12 PM, Shomesankar Bhunia
<rightclickatrighttime_at_gmail.com> wrote:
> Hello NAMD users,
> I want to run a molecular dynamics simulation with AMBER FF parameters in
> NAMD. Can anyone help me to find out how to set a configuration file to
> carry minimization equlibriation and simulation using AMBER FF parameters.
> Any tutorials regarding above will be very helpful. Thanks in advance.

i would start by reading the NAMD user's guide.

axel.

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  http://goo.gl/1wk0
International Centre for Theoretical Physics, Trieste. Italy.

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