AW: periodicity error

From: Norman Geist (norman.geist_at_uni-greifswald.de)
Date: Mon Sep 17 2012 - 09:15:29 CDT

• Next message: Norman Geist: "AW: AW: namd 2.9 not going so well"
• Previous message: Michael Galloway: "Re: AW: namd 2.9 not going so well"
• In reply to: Shomesankar Bhunia: "periodicity error"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

Using amber aswell, never seen this error.

What molecules does your system contain?

Show your namd input also.

Norman Geist.

Von: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] Im Auftrag
von Shomesankar Bhunia
Gesendet: Montag, 17. September 2012 11:34
An: namd-l_at_ks.uiuc.edu
Betreff: namd-l: periodicity error

Hii
 i am using AMBER FF in NAMD and i am getting the following error.

FATAL ERROR: The periodicity of dihedral # 41 is zero!

How to resolve it?

• Next message: Norman Geist: "AW: AW: namd 2.9 not going so well"
• Previous message: Michael Galloway: "Re: AW: namd 2.9 not going so well"
• In reply to: Shomesankar Bhunia: "periodicity error"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Mon Dec 31 2012 - 23:22:05 CST