From: Chris Harrison (charris5_at_gmail.com)
Date: Wed Feb 15 2012 - 15:09:45 CST
Swarna,
Clarification: POPC *is* in these topology files, but the test case
sent to you earlier that was built using these files was a DOPC and
not POPC system.
Best,
Chris
On Wed, Feb 15, 2012 at 3:02 PM, Chris Harrison <charris5_at_gmail.com> wrote:
> Dear Swarna,
>
> You can download the topology and parameter files used to build the
> DOPC test case from my site:
>
> http://www.ks.uiuc.edu/~char/martini/martini_dopc_test_topologies.tar.gz
>
> http://www.ks.uiuc.edu/~char/martini/martini_dopc_test_parameters.tar.gz
>
> Note that these are not POPC, but DOPC lipids.
>
>
> Best,
> Chris
>
>
>
> On Tue, Feb 14, 2012 at 9:41 PM, Swarna M Patra <swarnam.patra_at_gmail.com> wrote:
>> Hi namd users
>> I wan to do a CG simulation with martini forcefield using NAMD. please let
>> me know where can I download the topology/parameter files.
>> thanks
>> swarna
>
>
>
> --
> Chris Harrison, Ph.D.
> Theoretical and Computational Biophysics Group
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave., Urbana, IL 61801
>
> char_at_ks.uiuc.edu Voice: 773-570-6078
> http://www.ks.uiuc.edu/~char Fax: 217-244-6078
-- Chris Harrison, Ph.D. Theoretical and Computational Biophysics Group NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave., Urbana, IL 61801 char_at_ks.uiuc.edu Voice: 773-570-6078 http://www.ks.uiuc.edu/~char Fax: 217-244-6078
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