Re: Parameters/topology entries for non-standard nucleotides

From: Jérôme Hénin (
Date: Sat Feb 20 2010 - 10:40:04 CST

This is a CHARMM force field rather than NAMD-related question. You
may have more luck asking it on the appropriate CHARMM forum, where a
group of experienced and helpful people usually hang out.

On 19 February 2010 14:14, Thomas Kahn <> wrote:
> Are there any databases of parameter and topology entries for NAMD? I am looking particularly for 4 non-standard nucleotides (DC, 5BU, OMC, GDP). I have found the topology repository located here: but this does not contain the parameters I need.
> Thanks,
> Thomas Kahn

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