Error in Minimization

From: Ale Gomez (
Date: Sat Nov 07 2009 - 10:45:24 CST

Hi everyone.
I try to minimize a protein, bacrhodopsin, in a lipid membrane. But
everything looks great until minimize is ready. When I saw the log file
seems that anything had change. Could anybody help me.
I attached preparation script for vmd (preparacion.tcl) and minimize script
for namd (bacmin.conf).

Ale Gomez
Biophysics and Molecular Modelling Group
Physics Department
Escuela Politecnica Nacional, Quito-Ecuador
Ladron de Guevara E11-253.
Phone: 593-95292408

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