Re: SiCortex with Pathscale

From: Peter Freddolino (
Date: Mon May 11 2009 - 12:02:14 CDT

Hi Chris,
I have no experience with those clusters, but I can tell you that it
would be easier for us to help if you can tell us the actual error
message that you end up with.

Christopher Hartshorn wrote:
> Hello everyone. I have been trying for a week now to compile namd for a
> SiCortex cluster (these so-called "green" computers) using its internal
> Pathscale compiler suite. I can get the fftw and TCL to compile even
> charm++ most of the time, but namd fails to compile everytime when it
> starts to put all the pieces (.o files) together for an executable. I
> try everything to correct for the errors I receive at this step, but
> always get some new reason as to why it fails at this step (which
> unfortunately is at the end of a one hour long compile sequence). Has
> anyone successfully compiled on one of these machines? and if you have
> could you tell me how you did it, please?
> Best,
> Chris Hartshorn

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