Re: Large Benchmarks

From: Richard Law (
Date: Thu Oct 11 2007 - 15:00:15 CDT

Why not just build a box of water with how ever many atoms you want to


On Thu, 11 Oct 2007, Philip Peartree wrote:

> Hi,
> I'm currently benchmarking a Cray XT4 system with NAMD and I'd like to get hold
> of a large system... all my current simulations are less than 100000 atoms...
> are there any larger benchmark systems that I can run? I've heard that F1-ATP
> synthase being used as a larger benchmark, could anyone point me in the
> direction of input files for this, if there are any that is?
> Thanks
> Philip Peartree

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