solvating long protein

From: Dhiraj Srivastava (
Date: Wed Oct 03 2007 - 13:54:47 CDT

Hi All
       distance between two ends of my protein is around 150 A and is
horseshoe shaped. I am using the command "solvate prodh.psf prodh.pdb -t 10
-o prodh_wb". is it correct or do i need to take any precaution like need to
reorient my system so that its length allign with any particular direction

Thank you

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