Re: Amber PARM Input File Example?

From: wang (c00jsw00_at_nchc.org.tw)
Date: Fri Apr 27 2007 - 02:43:38 CDT

Huy N. Ha ??:

> I was wondering if anyone has an example of a PARM format file,
> generated via AMBER 6+ (preferably 7 and above).
> I am planning to use the AMBER force field, and generate custom PARM
> files to use with NAMD. TIA
>
> Mr. Huy Ha
> B. Med. Chem. Honours Student
> Dept. of Medicinal Chemistry
> Victorian College of Pharmacy
> Monash University
> 381 Royal Parade
> Parkville 3052
> Phone No: 99039136
>
Hi ,
Followed the example :

______________________________________________________________
# Input
amber on # Specify this is AMBER force field
parmfile GVX.top # Input PARM file
ambercoor GVX.crd # Input coordinate file
_______________________________________________________________

good luck

Y.T Wang

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