Re: how add bond in psf file?

From: luca (bellucci14_at_unisi.it)
Date: Tue Sep 26 2006 - 08:09:09 CDT

Thank You, Jim
I have some question:
When I apply "tclforce" in atoms that not are bonded, how is vdw interaction
deal?
Can I model a semirigid conformation state, like transition state or metal
complex with TclForce method?
Are there documetion for it

Thanks in advance
Luca
   
>NAMD takes bonds seriously, since they are used to derive exclusions.
>Your best option is to implement that H-O restraint in TclForces.
>-Jim

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