From: Brian Bennion (brian_at_youkai.llnl.gov)
Date: Thu Sep 07 2006 - 12:59:52 CDT
Can you set the compiler to ICC and see if the same error occurs?
On Thu, 7 Sep 2006, Jacob Poehlsgaard wrote:
> Dear NAMD list users
>
> We just had our old cluster upgraded to a 800 core intel woodcrest system.
> Unfortunately the EMT64 binary (
> <http://www.ks.uiuc.edu/Development/Download/download.cgi?UserID=&AccessCode
> =&ArchiveID=902> Linux-amd64) is unstable and crashes about 45 minutes into
> a test simulation that completes without error on the generic Linux-i686
> binary.
>
> Obviously we'd like to run a version optimized for our cluster, so we tried
> compiling from the source. However this failed when compiling charm++, with
> a rather esoteric error: "MsgPacker.h:86: error: extra qualification
> ‘MsgPacker::’ on member ‘MsgPacker’"
>
> Any good suggestions for getting around this? I'm told we have all kinds of
> compilers installed and ready to go :o)
>
>
> More error info:
> ---------------------------------
>
> creating ../../../../lib/libmoduleCkMulticast.a/bin/cp CkMulticast.decl.h
> ./../../../include /bin/cp CkMulticast.def.h ../../../../include /bin/cp
> ckmulticast.h ../../../../include
>
> gmake[2]: Leaving directory
>
> `/tmp/NAMD-TOP/NAMD_2.6_Source/charm-5.9/net-linux-amd64/tmp/libs/ck-libs/mu
> lticast'
>
> ./bin/charmc -O -DCMK_OPTIMIZE=1 -nobs -c -I. ComlibManager.C
>
> MsgPacker.h:86: error: extra qualification ‘MsgPacker::’ on member
> ‘MsgPacker’
>
> Fatal Error by charmc in directory
> /tmp/NAMD-TOP/NAMD_2.6_Source/charm-5.9/net-linux-amd64/tmp
>
> Command g++ -fPIC -m64 -I../bin/../include -D__CHARMC__=1
>
> -DCMK_OPTIMIZE=1 -I. -O -c ComlibManager.C -o ComlibManager.o returned error
> code 1 charmc exiting...
>
> gmake[1]: *** [ComlibManager.o] Error 1
>
> gmake[1]: Leaving directory
>
> `/tmp/NAMD-TOP/NAMD_2.6_Source/charm-5.9/net-linux-amd64/tmp'
>
> gmake: *** [charm++] Error 2
>
> -------------------------------------------------
>
> Charm++ NOT BUILT.
>
> ---------------------------------
>
> Jacob Poehlsgaard
> PhD student,
> Institute for Biochemistry and Molecular Biology
> University of Southern Denmark
>
>
************************************************
Brian Bennion, Ph.D.
Biosciences Directorate
Lawrence Livermore National Laboratory
P.O. Box 808, L-446 bennion1_at_llnl.gov
7000 East Avenue phone: (925) 422-5722
Livermore, CA 94550 fax: (925) 424-5513
************************************************
This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:42:34 CST