From: Michel Espinoza-Fonseca (mef_at_ddt.biochem.umn.edu)
Date: Tue Nov 01 2005 - 10:16:43 CST
Topology and parameter files for ADP are located in the stream files folder. There you can find the files you need.
From: owner-namd-l_at_ks.uiuc.edu on behalf of Grace Shen
Sent: Tue 11/1/2005 9:48 AM
To: NAMD Users List
Subject: namd-l: About ADP
I searched the web and found that a lot of people said that top_all27_prot_na.inp and par_all27_prot_na.inp files have parameters for ADP. I only can found top_all27_prot_na.rtf and par_all27_prot_na.prm files from Alex Mackerell's homepage. But there is no "ADP" information in these two files.
Could someone please tell me what happened and how can I get ADP force field parameters?
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