From: Brian Bennion (brian_at_youkai.llnl.gov)
Date: Thu Mar 10 2005 - 14:11:29 CST
Jordi,
Quickly, just block strstream.h from being searched for, its not needed(?)
ie in the arch file
Linux-PPC-MPI-xlC.arch
add
-DNO_STREAM_H
On Thu, 10 Mar 2005, Jordi Camps wrote:
> Hello everybody,
>
> I'm trying to compile NAMD on a cluster of PPC970 (G5) processors connected
> through a Myrinet and using a SuSe Linux 2.6.5 as operating system. The
> compiler set that I want to use is the IBM compilers: xlc, xlC, *_r...
>
> At this first stage I'm trying to compile only the basic NAMD: no fftw, no
> tcl, no plugins.
>
> I updated the charm++ to the last version (5.8) and it compiled OK and
> passed megatest tests with up to 16 processors (8 nodes).
>
> But when I try to compile the NAMD, I get some errors. The process followed
> to compile NAMD has been this:
> Update Make.charm
> Create files Linux-PPC-MPI-xlC.arch & Linux-PPC-MPI-xlC.base (.fftw,
> .tcl & .plugins coming soon ;-))
> ./config Linux-PPC-MPI-xlC
> cd Linux-PPC-MPI-xlC
> make
>
> But the first lines say this:
> mkdir inc
> mkdir obj
> mpicxx -w -DSOCKLEN_T=size_t
> -I.rootdir/charm-5.8/mpi-linux-gm2-xlc64/include -DCMK_OPTIMIZE=1 -Isrc
> -Iinc -DNAMD_VERSION=\"2.5\" -DNAMD_PLATFORM=\"Linux-PPC-MPI-xlC-MPI\" -O3
> -o obj/common.o -c src/common.C
> "src/InfoStream.h", line 17.10: 1540-0836 (S) The #include file
> <strstream.h> is not found.
> make: *** [obj/common.o] Error 1
>
> If I edit the InfoStream.h file and change <strstream.h> to <strstream> I
> get another bunch of messages like:
> "src/common.C", line 218.3: 1540-0256 (I) A parameter of type
> "std::basic_ostream<char,std::char_traits<char> > &" cannot be initialized
> with an expression of type "infostream".
> "src/InfoStream.h", line 67.13: 1540-1283 (I) "operator<<(infostream
> &, const Vector &)" is not a viable candidate."
>
> Someone has compiled NAMD with xlC? Someone can help me?
>
> Thanks in advance.
>
> --
>
> Jordi Camps Puchades
>
> Instituto Nacional de Bioinformatica (INB) Nodo Computacional GNHC-2
> UPC-CIRI
> c/. Jordi Girona 1-3
> Modul C6-E201 Tel. : 934 011 650
> E-08034 Barcelona Fax : 934 017 014
> Catalunya (Spain) e-mail: jcamps_at_lsi.upc.edu
>
************************************************
Brian Bennion, Ph.D.
Bioscience Directorate
Lawrence Livermore National Laboratory
P.O. Box 808, L-448 bennion1_at_llnl.gov
7000 East Avenue phone: (925) 422-5722
Livermore, CA 94550 fax: (925) 424-6605
************************************************
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