constant velocity smd with distance restraints

From: Gilbert G.Feng (gfeng2_at_uic.edu)
Date: Fri Dec 03 2004 - 14:22:50 CST

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Hi, there

I want to run a general constant velocity smd simulation with restraining
the distance of several pairs of atoms. It looks the restraining commands
should be in a TCL file, but, as you know, for the general constant
velocity SMD, NAMD can calculate the force automatically without any extra
TCL force file. So how can I run this type of simulation?

Thanks

Gilbert

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