From: Brian Bennion (brian_at_youkai.llnl.gov)
Date: Thu Feb 26 2004 - 12:09:18 CST
Could you supply the command that you try to invoke namd with on your
cluster?
Is your nodelist current/valid?
Brian
On Thu, 26 Feb 2004, Ben Brooks wrote:
> I am attempting to create a small cluster to run NAMD. I am having trouble
> getting communication between the systems. If I run in debug mode, on all of
> the slave machines I get the following error: Charm++: standalone mode (not
> using charmrun) Fatal Socket error: code 93523-Error in accept"
>
> I am running Redhat 8. I just disabled all of the iptables. I also running
> NAMD 2.5.
>
> Since I am new to NAMD, I would greatly appreciate any help. Thanks.
>
> Ben Brooks
> Graduate Student U. of Wyoming, Department of Molecular Biology.
>
*****************************************************************
**Brian Bennion, Ph.D. **
**Computational and Systems Biology Division **
**Biology and Biotechnology Research Program **
**Lawrence Livermore National Laboratory **
**P.O. Box 808, L-448 bennion1_at_llnl.gov **
**7000 East Avenue phone: (925) 422-5722 **
**Livermore, CA 94550 fax: (925) 424-6605 **
*****************************************************************
This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:38:27 CST