coarse grained model

From: Giovanni (
Date: Fri May 07 2004 - 05:02:57 CDT

I think I already posted this topic but I didn't receive any reply.
I am, at present, using NAMD to simulate protein systems using charmm
par file.
My point is to know if it's possible to use the scalability features of
NAMD to run SD simulations of minimal models of those systems
(2 or 3 interacting centers per AA ) obviously using a simplified Force
Anyone had any experience in this ?



Giovanni Bellesia
Theory and Computation Group
Department of Chemistry
University College Dublin
Belfield, Dublin 4, Ireland

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