Hydroxyprolin force field.

From: ivan.vinogradov_at_utoronto.ca
Date: Fri Jan 23 2004 - 11:01:36 CST

Hello All,

I am currently trying to minimize a collagen model.
Unfortunately (for minimization) it has a rather large number of HYP residues
in it.
Neither top_*.inp nor par_*.inp files available from charmm website seem to
contain HYP data.
Search on the web netted no sufficient results.
I have found a top_hyp.inp file in this m-list archive but now NAMD complains
about missing bonds in par*.inp file.
What would be a solution to the problem?

Cheers, Ivan.
 

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