Negative Forces in SMD Simulations

From: Souvik Dey (sdey8_at_uic.edu)
Date: Thu May 21 2020 - 16:45:28 CDT

• Next message: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Previous message: Oscar Bastidas: "Re: Format of 'dcdfreq' field in conf file"
• Next in thread: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Reply: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

Dear NAMD users,

I have been trying to do an SMD simulation and I keep getting negative
forces throughout the simulations. Why is something like this happening?
Does this mean I am doing something wrong?

I followed the exact same protocol like it was given in the NAMD tutorial (
https://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-html/node16.html
)

Thanks in advance.

Regards,
Souvik

• Next message: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Previous message: Oscar Bastidas: "Re: Format of 'dcdfreq' field in conf file"
• Next in thread: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Reply: Josh Vermaas: "Re: Negative Forces in SMD Simulations"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Fri Dec 31 2021 - 23:17:09 CST