From: Peter Rosenquist (per20_at_georgetown.edu)
Date: Thu Nov 12 2020 - 15:00:38 CST
I am trying to add a custom bias potential along the lines of aMD or GaMD,
specifically the /delta*V(r) of: V*(r) = V(r) + /delta*V(r), where V(r) is
original potential and /delta*V(r) is defined as the output of my custom
function p(r). How does aMD add the bias potential? Is there another way to
do this in NAMD?
This archive was generated by hypermail 2.1.6 : Thu Dec 31 2020 - 23:17:14 CST