Re: missing parameters.

From: Brian Radak (
Date: Wed Nov 15 2017 - 08:10:46 CST

This is likely a topology and parameter problem. What force field are
you using? What format? XPLOR? AMBER? How did you construct the system?

On 11/15/2017 07:53 AM, NEHİR NALINCI wrote:
> Hİ everyone,
>  I took single strand DNA which contains A, G, C, T from the protein
> data bank, but I didn't run the my simulation, because some dihedral
> parameters are missing in the parameter files such as " ON1 CN1 CN3T
> CN3 ".  I tried to add all paramater files to take care of these
> dihedrals. How can I solve this problem?
> Thank you for interest.

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