Re: Querries on eABF

From: Souvik Sinha (souvik.sinha893_at_gmail.com)
Date: Tue May 30 2017 - 07:37:19 CDT

Thanks for the reply.

I think we can use semi-eABF for cases where system force is available for
one of the RC (so classical ABF is applicable here) but not the other one
(considering 2 RCs). So that other RC can be treated with eABF. But I am
not certain about it.

Souvik

On Tue, May 30, 2017 at 5:56 PM, <yjcoshc_at_gmail.com> wrote:

> Hi,
>
> 1. The r_colvarName is the value of extended variable (or fictitious
> particle). In *Smoothed Biasing Forces Yield Unbiased Free Energies with
> the Extended-System Adaptive Biasing Force Method*, it's called λ.
>
> 2. Also I don't figure out when to use semi-eABF. I just read it on the
> article and have never use it.
>
> yjcoshc
>
> 在 2017年05月30日 15:51, Souvik Sinha 写道:
>
> Hi,
>
> 1. I am running a 2D eABF using "alpha" & "distanceZ" colvars as my 2 RCs--001a114270528674a60550bd1039--

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