From: Giacomo Fiorin (giacomo.fiorin_at_gmail.com)
Date: Wed Feb 01 2017 - 12:49:24 CST
Please reply to the list.
The script ./update-colvars-code.sh does not update a binary version of
NAMD, only the source code, which you need to recompile.
You are also confusing the NAMD version (2.12 is the latest) with the
Lastly, have you checked for any other more informative error messages
above (see my previous message)? I won't ask you a third time.
On Wed, Feb 1, 2017 at 1:42 PM, Jessen Lucas <jessenlucas0_at_gmail.com> wrote:
> Thanks, I am using Linux-x86_64-ibverbs-smp
> <http://www.ks.uiuc.edu/Development/Download/download.cgi?UserID=&AccessCode=&ArchiveID=1500> (InfiniBand
> plus shared memory, no MPI needed), I guess it is because I did not update
> the latest version. I am trying to update using ./update-colvars-code.sh
> /path/to/NAMD/, but it Cannot detect a supported code in the target
> directory, is it possible update colvar to Linux-x86_64-ibverbs-smp
> version directly?
> Thank you.
> 2017-02-02 2:31 GMT+08:00 Giacomo Fiorin <giacomo.fiorin_at_gmail.com>:
>> Hi Jessen, the last line is printed by NAMD to tell you which component
>> the error occurred in, but do you seen any other error messages earlier?
>> Also, please include the code version, thanks.
>> On Wed, Feb 1, 2017 at 12:47 PM, Jessen Lucas <jessenlucas0_at_gmail.com>
>>> I am trying the colvar module in NAMD, when I run the test examples on
>>> github or any example in NAMD tutorial, all tests works. However, when I
>>> try to modify the colvar configfile, even I change
>>> colvarsTrajFrequency 200
>>> colvarsTrajFrequency 100,
>>> NAMD will tell me Charm++ fatal error:
>>> FATAL ERROR: Error in the collective variables module: exiting.
>>> Anyone can help me?
>>> Thanks in advance.
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