From: Alexander Tzanov (Alexander.Tzanov_at_csi.cuny.edu)
Date: Wed Jun 24 2015 - 09:56:18 CDT
Dear all,
I am trying to run NAMD 2.10 with CUDA support on single virtual node. My CUDA is 6.5.14. I am running
on IB cluster which runs PBS pro ver. 12.1.0.131281. I want to run on a single virtual node with
4 CPU cores and 2 GPU (the CPU itself has 16 cores). I compiled NAMD with cuda support
(mpi, smp CHARMM++ underneath). However when the NAMD cannot address more than one core.
As a result I get error “ Not enough slots”. Does anyone see the problem and if so to share his/her experience.
Thank you
Alex
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