NAMD and new FF CHARMM36

From: Gianluca Interlandi (
Date: Wed Dec 12 2012 - 14:26:07 CST


Can the current version of NAMD be used together with the new CHARMM36
force field? The parameter files are "top_all36_prot.rtf" and
"par_all36_prot.prm". However, topology and parameters for water and ions
are now in a CHARMM stream file "toppar_water_ions.str". How can I use
this in NAMD?



Gianluca Interlandi, PhD
                     +1 (206) 685 4435

Research Scientist at the Department of Bioengineering
at the University of Washington, Seattle WA U.S.A.

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