Re: FATAL ERROR: CUDA error in cudaGetDeviceCount on Pe 0 (thomasASUS): CUDA driver version is insufficient for CUDA runtime version

From: Thomas Evangelidis (tevang3_at_gmail.com)
Date: Sat Sep 22 2012 - 08:19:11 CDT

Do I have any chance to make it work if I compile it on my Laptop with the
current settings?

T.

On 22 September 2012 15:56, Chris Harrison <charris5_at_gmail.com> wrote:

> You'll need to resolve your problem with installation of the proprietary
> drivers to get NAMD working on your GPU.
>
> Best,
> Chris
>
>
> Thomas Evangelidis <tevang3_at_gmail.com> writes:
> > Date: Sat, 22 Sep 2012 15:41:25 +0300
> > From: Thomas Evangelidis <tevang3_at_gmail.com>
> > To: namd-l <namd-l_at_ks.uiuc.edu>
> > Subject: namd-l: FATAL ERROR: CUDA error in cudaGetDeviceCount on Pe 0
> > (thomasASUS): CUDA driver version is insufficient for CUDA runtime
> version
> >
> > Greetings,
> >
> > I have an ASUS N56V laptop with a GeForce GT 650 M, running Fedora 17
> > 64-bit. The proprietary NVIDIA drivers failed to install so I followed
> the
> > instructions from the following page to set up nouveau and bumblebee in
> > order to install CUDA 4.2.
> >
> >
> http://duxyng.wordpress.com/2012/01/26/finally-working-nvidia-optimus-on-fedora-16/
> >
> > The CUDA tests run successfully. However, when I try to run the ApoA1
> > benchmark within the latest NAMD nightly build directory, I get the
> > following error:
> >
> > $ export LD_LIBRARY_PATH=`pwd` && ./namd2 +idlepoll apoa1.namd
> > Charm++: standalone mode (not using charmrun)
> > Converse/Charm++ Commit ID: v6.4.0-beta1-0-g5776d21
> > CharmLB> Load balancer assumes all CPUs are same.
> > Charm++> Running on 1 unique compute nodes (8-way SMP).
> > Charm++> cpu topology info is gathered in 0.000 seconds.
> > Info: NAMD CVS-2012-09-22 for Linux-x86_64-multicore-CUDA
> > Info:
> > Info: Please visit http://www.ks.uiuc.edu/Research/namd/
> > Info: for updates, documentation, and support information.
> > Info:
> > Info: Please cite Phillips et al., J. Comp. Chem. 26:1781-1802 (2005)
> > Info: in all publications reporting results obtained with NAMD.
> > Info:
> > Info: Based on Charm++/Converse 60400 for multicore-linux64-iccstatic
> > Info: Built Sat Sep 22 02:25:04 CDT 2012 by jim on lisboa.ks.uiuc.edu
> > Info: 1 NAMD CVS-2012-09-22 Linux-x86_64-multicore-CUDA 1
> thomasASUS
> > thomas
> > Info: Running on 1 processors, 1 nodes, 1 physical nodes.
> > Info: CPU topology information available.
> > Info: Charm++/Converse parallel runtime startup completed at 0.00364304 s
> > FATAL ERROR: CUDA error in cudaGetDeviceCount on Pe 0 (thomasASUS): CUDA
> > driver version is insufficient for CUDA runtime version
> > ------------- Processor 0 Exiting: Called CmiAbort ------------
> > Reason: FATAL ERROR: CUDA error in cudaGetDeviceCount on Pe 0
> (thomasASUS):
> > CUDA driver version is insufficient for CUDA runtime version
> >
> > [0] Stack Traceback:
> > [0:0] CmiAbort+0x95 [0xbfcb85]
> > [0:1] _Z8NAMD_diePKc+0x62 [0x5aed32]
> > [0:2] _Z13cuda_errcheckPKc+0x14a [0x797538]
> > [0:3] _Z15cuda_initializev+0x194 [0x796d3a]
> > [0:4] _Z8all_initiPPc+0x55 [0x5b80a5]
> > [0:5] _Z11master_initiPPc+0x67 [0x5b7cd7]
> > [0:6] _ZN7BackEnd4initEiPPc+0xe8 [0x5b7c50]
> > [0:7] main+0x2f [0x5b2e57]
> > [0:8] __libc_start_main+0xf5 [0x3f20221735]
> > [0:9] _ZNSt8ios_base4InitD1Ev+0x6a [0x548a8a]
> > Charm++ fatal error:
> > FATAL ERROR: CUDA error in cudaGetDeviceCount on Pe 0 (thomasASUS): CUDA
> > driver version is insufficient for CUDA runtime version
> >
> > [0] Stack Traceback:
> > [0:0] [0xbfdab5]
> > [0:1] CmiAbort+0xd3 [0xbfcbc3]
> > [0:2] _Z8NAMD_diePKc+0x62 [0x5aed32]
> > [0:3] _Z13cuda_errcheckPKc+0x14a [0x797538]
> > [0:4] _Z15cuda_initializev+0x194 [0x796d3a]
> > [0:5] _Z8all_initiPPc+0x55 [0x5b80a5]
> > [0:6] _Z11master_initiPPc+0x67 [0x5b7cd7]
> > [0:7] _ZN7BackEnd4initEiPPc+0xe8 [0x5b7c50]
> > [0:8] main+0x2f [0x5b2e57]
> > [0:9] __libc_start_main+0xf5 [0x3f20221735]
> > [0:10] _ZNSt8ios_base4InitD1Ev+0x6a [0x548a8a]
> > Aborted (core dumped)
> >
> > Is it because I don't have the proprietary NVIDIA drivers installed, or
> > because I have Cuda 4.2 instead of 4.0? Then why can I run successfully
> > other programs with the GPU, including GROMACS?
> >
> > Thanks in advance.
> > Thomas
> >
> >
> >
> > --
> >
> > ======================================================================
> >
> > Thomas Evangelidis
> >
> > PhD student
> > University of Athens
> > Faculty of Pharmacy
> > Department of Pharmaceutical Chemistry
> > Panepistimioupoli-Zografou
> > 157 71 Athens
> > GREECE
> >
> > email: tevang_at_pharm.uoa.gr
> >
> > tevang3_at_gmail.com
> >
> >
> > website: https://sites.google.com/site/thomasevangelidishomepage/
>
>
> Best,
> Chris
>
>
> --
> Chris Harrison, Ph.D.
> NIH Center for Macromolecular Modeling and Bioinformatics
> Theoretical and Computational Biophysics Group
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave., Urbana, IL 61801
>
> http://www.ks.uiuc.edu/Research/namd Voice: 773-570-6078
> http://www.ks.uiuc.edu/~char Fax: 217-244-6078
>
>
>

-- 
======================================================================
Thomas Evangelidis
PhD student
University of Athens
Faculty of Pharmacy
Department of Pharmaceutical Chemistry
Panepistimioupoli-Zografou
157 71 Athens
GREECE
email: tevang_at_pharm.uoa.gr
          tevang3_at_gmail.com
website: https://sites.google.com/site/thomasevangelidishomepage/

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